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Journal of Bacteriology, July 2004, p . 4568-4574, Vol . 186,
No . 14
Transposition of the Heat-Stable Toxin astA Gene into a Gifsy-2-Related
Prophage of Salmonella enterica Serovar Abortusovis
Donatella Bacciu,1 Giovanni Falchi,1 Alessandra
Spazziani,1 Lionello Bossi,2 Gavino Marogna,3
Guido Sisinnio Leori,3 Salvatore Rubino,1 and Sergio Uzzau1*
Department of Biomedical Sciences, Center for Biotechnology Development and
Biodiversity Research, University of Sassari,1 Istituto
Zooprofilattico Sperimentale della Sardegna, 07100 Sassari, Italy,3
Centre de Génétique Moléculaire, CNRS, 91198 Gif-sur-Yvette, France2
Received 7 January 2004/ Accepted 15 April 2004
The horizontal transfer and acquisition of virulence genes via mobile
genetic elements have been a major driving force in the evolution of
Salmonella pathogenicity . Serovars of Salmonella enterica
carry variable assortments of phage-encoded virulence genes,
suggesting that temperate phages play a pivotal role in this process .
Epidemic isolates of S . enterica serovar Typhimurium are
consistently lysogenic for two lambdoid phages, Gifsy-1 and Gifsy-2,
carrying known virulence genes . Other serovars of S . enterica,
including serovars Dublin, Gallinarum, Enteritidis, and Hadar, carry
distinct prophages with similarity to the Gifsy phages . In this
study, we analyzed Gifsy-related loci from S . enterica serovar
Abortusovis, a pathogen associated exclusively with ovine infection .
A cryptic prophage, closely related to serovar Typhimurium phage
Gifsy-2, was identified . This element, named Gifsy-2AO, was shown to
contribute to serovar Abortusovis systemic infection in lambs .
Sequence analysis of the prophage b region showed a large deletion
which covers genes encoding phage tail fiber proteins and putative
virulence factors, including type III secreted effector protein SseI
(GtgB, SrfH) . This deletion was identified in most of the serovar
Abortusovis isolates tested and might be dependent on the replicative
transposition of an adjacent insertion sequence, IS1414,
previously identified in pathogenic Escherichia coli strains .
IS1414 encodes heat-stable toxin EAST1 (astA) and
showed multiple genomic copies in isolates of serovar Abortusovis . To
our knowledge, this is the first evidence of intergeneric transfer of
virulence genes via insertion sequence elements in Salmonella .
The acquisition of IS1414 (EAST1) and its frequent
transposition within the chromosome might improve the fitness of
serovar Abortusovis within its narrow ecological niche .
Salmonella enterica serovar Abortusovis is a pathogen that occurs
only in ovines, and it ranks as the most frequently isolated
serovar in cases of ovine salmonellosis in Italy and other European
countries (33) . Serovar Abortusovis causes a systemic
infection that can be lethal in newborn lambs and that can result in
abortion in pregnant ewes . However, infection of adult animals occurs
without clinical symptoms (33) . Like other
host-restricted serovars (i.e., S . enterica serovar Typhi),
serovar Abortusovis infection induces a low level of mucosal
inflammation (31) . During the systemic phase of
infection, serovar Abortusovis bacteria reach high numbers in the
placenta and tissues of the aborted fetus, and they are shed by
vaginal discharges up to 12 days following abortion, allowing
dissemination in the environment and infection of new hosts . In this
respect, the pathophysiology of serovar Abortusovis appears very
different from that of S . enterica serovars Typhimurium and
Enteritidis, which are common causes of gastroenteritis in a broad
range of animal species .
Recent studies suggest that the ability of S . enterica serovars
to gain diverse virulence traits and to adapt to a variety of
animal hosts may be due partly to the variable distribution of
effector protein genes carried by temperate bacteriophages (8,
26) . Upon lysogenic conversion, virulence functions provided
by prophages may ameliorate the fitness of pathogenic salmonellae
within the host tissues or increase transmissibility and survival
in the host population .
Functional phages containing genes that encode virulence effectors
have been isolated, to date, only from strains of serovar Typhimurium .
P2-like SopE
was isolated from a few serovar Typhimurium strains, including SL1344
and epidemic strain DT204 (8, 10) . This
phage carries the gene that encodes SopE, an effector protein
translocated by the Salmonella pathogenicity island 1 type III
secretion system (TTSS) . In other sopE-positive Salmonella
strains belonging to S . enterica serovars Gallinarum, Hadar,
Dublin, and Enteritidis, the sopE gene is carried by a cryptic
lambdoid prophage similar to the Gifsy-1 and Gifsy-2 phages (20) .
Lambdoid phage Gifsy-3 has been isolated uniquely from serovar
Typhimurium strain ATCC 14028s (8) . This phage also
carries the gene that encodes a TTSS-translocated effector, SspH1 . In
addition, sspH1 has been detected in Salmonella bongori
and in a few serotypes of S . enterica subspecies houtenae
and indica (30) . Lambdoid phages Gifsy-1
and Gifsy-2, in contrast, are present in all serovar Typhimurium
epidemic isolates tested so far (8) .
Given the variable distribution of phage-carried virulence genes,
the comparative analysis of these genes in serovars of S . enterica
with distinct pathogenic traits and host adaptations may help
to define the relative roles of these virulence effectors . In this
study, we examined whether epidemic strains of serovar Abortusovis
carry lambdoid prophages or prophage-like elements carrying virulence
genes . We found that serovar Abortusovis carries a Gifsy-2-related
cryptic prophage, named Gifsy-2AO, inserted in the same chromosomal
position as serovar Typhimurium Gifsy-2 prophage . The deletion of
Gifsy-2AO had no effect on intestinal invasion but attenuated
virulence in the systemic phase of lamb infection . Sequence analysis
of Gifsy-2AO showed a deletion of ca . 6 kbp within the prophage b
region, corresponding to tail fiber genes stfT and tfaT
and putative virulence genes sseI (gtgB), gtgC,
and gtgD carried by Gifsy-2 . This deletion is consistent for
all European strains tested, and the deleted region is adjacent to an
insertion sequence (IS) element that is 99% identical to IS1414
described for enterotoxigenic Escherichia coli (ETEC) strain
27D (17) .
Bacterial strains. The bacterial strains studied are listed in
Table 1 . SS44 and 15/5 are reference strains of
serovar Abortusovis . SS44 is an isolate from sheep originating from
Sardinia, Italy, that has been used extensively in virulence studies
(27, 31, 34) . 15/5
is a French isolate that has been used to analyze the immune
response of sheep to serovar Abortusovis (9, 14,
22, 23) . Additional S .
enterica strains analyzed by PCR and Southern blot hybridization
were from our personal collection of clinical isolates . Twenty-two
serovar Agona strains were isolated from pigs in Brazil (provided by
M . Cardoso, Universidade Federal do Rio Grande do Sul, Porto Alegre,
Brazil) . Sixty-six epidemic strains were human isolates from
Zimbabwe . This collection includes 28 strains of serovar Typhimurium;
9 strains of serovar Enteritidis; 4 strains of serovar Typhi; 2
strains each of serovars Decatur, Bovismorbificans, Infantis, Isangi,
Tennessee, and Otomarscens; and 1 strain each of serovars Vejle,
Weltevreden, Gaminara, Heidelberg, Rissen, Scheissheim, Senftenberg,
Shwarzengrung, Bonn, Blegdam, II 16:–:1,7, II 16:g,t:z42, and II
9,12:m,t:– . An epidemic strain of ETEC isolated in Pakistan (strain
SSM3422) was used as a positive control in astA gene detection
assays . Finally, we made use of a collection of 67 serovar
Abortusovis epidemic strains, of which 35 originated from Italy, 2
from France, 6 from Albania, 1 from Russia, 1 from the United
Kingdom, and 22 from Iran .
| TABLE 1 . Strains used in this study
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Genetic procedures. Genetic manipulations and PCR
amplifications were performed according to standard methods . Primers
used in this study are given in Table 2 . Southern
hybridizations were performed by using EcoRI- or HindIII-digested
chromosomal DNA electrophoresed through 0.8% agarose and transferred
onto a nylon membrane . Primer pairs REC1 and REC2, 03-01 and 03-02,
03-03 and 03-04, 02-37 and 02-38, SOD1 and SOD2, 02-11 and 02-12, and
02-20 and 02-21 were used to amplify the recE, orfH,
stfT, gogB, sodC1, gtgE, and astA
genes, respectively . PCR products were labeled with fluorescein
(Amersham) and used as probes to hybridize digested genomic DNA from
serovar Abortusovis strains SS44 and 15/5 . Serovar Typhimurium strain
ATCC 14028s was used as a control . Analysis of Gifsy-1 and Gifsy-2
integration into the respective attB sites was performed as
described in Results . In brief, primers pp12 and pp16 were used to
amplify a 460-bp fragment corresponding to the Gifsy-1 attB
site and adjacent chromosomal sequences (phage-free strains) . Primer
pair pp12 and pp38 were used to amplify a 645-bp fragment
corresponding to the junction between the chromosome and the "left"
end of the inserted Gifsy-1 prophage (lysogenic strains) . The same
strategy was applied to analyze the Gifsy-2 attB site with
primer pair pp30 and pp27 (303 bp) and primer pair pp27 and pp35 (632
bp) . The amplification of Gifsy-2AO b region sequences from serovar
Abortusovis strains SS44 and 15/5 was performed by arbitrary PCR (15) .
PCR products were then cloned by using TA-cloning technology
(Invitrogen) . Sequencing was performed with an ABI 3100 automated DNA
sequencer (Applied Biosystems) . We made use of the technique
described by Datsenko and Wanner to obtain deletion mutants SSM2993 ( gtgE),
SSM2994 ( sodC1),
and SSM2992 ( Gifsy-2AO)
(2) . PCR primers of 60 nucleotides (nt) were
synthetized with 40 nt at the 5' end corresponding to the endpoints
of the deletion required . The deletion of gtgE and sodC1
coincided with nt 52 to 622 and nt 61 to 520 of the respective open
reading frames . To obtain a gtgE sodC1 double mutant
(SSM3227), we made use of the Flp resolvase method to delete the
kanamycin cassette inserted into the gtgE mutant strain
SSM2992 . The sodC1 deletion was then moved in by P22
transduction . To obtain strain SSM2992, oligonucleotides were
synthetized to achieve a deletion encompassing the whole Gifsy-2AO
element (bp 1098220 to 1143961 as defined in the S . enterica
serovar Typhimurium LT2 genome sequence at the National Center for
Biotechnology Information) . The 20 nt at the primers' 3' ends anneal
to priming sites P1 and P2 of pKD4 (2) .
| TABLE 2 . Primers used in this study
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Lamb infections. One- to two-month-old Sarda lambs with no
cultural or serological evidence of Salmonella infection were
used . Competitive infections were performed as previously described (32) .
Lambs were infected orally with a total of 1
x 108 to 5
x 108 CFU or intravenously
(i.v.) with 2 x 107 to 5
x 107 CFU . Inocula were obtained
by growing strains statically at 37°C for 18 h . For oral infection,
bacterial suspensions (2.5 ml) were mixed 1:1 with antacid [5%
(wt/vol) Mg(SiO3)3, 5% (wt/vol) NaHCO3, 5%
(wt/vol) MgCO3] and administered orally to animals
immediately before the morning feeding . At 3 to 5 days postinfection,
the animals were killed by pentobarbitone overdose . Samples of
approximately 1 g were taken in triplicate from all tissues analyzed .
The systemic samples (from the liver, spleen, and mesenteric lymph
nodes [MLN]) were taken first to avoid contamination with the
intestinal contents . Tissues were homogenized, and dilutions were
plated, in triplicate, on Luria-Bertani (LB) agar plates supplemented
with X-Gal (5-bromo-4-chloro-3-indolyl-ß-D-galactopyranoside;
80 µg/ml), L-arabinose (1 mM), and kanamycin (50
mg/ml) . The competitiveness index (CI) was calculated as (percentage
of strain A recovered/percentage of strain B recovered)/(percentage
of strain A inoculated/percentage of strain B inoculated) .
Ovine ileal loop invasion assay. The ovine ileal loop
invasion assay was performed as previously described (35) .
Four- to five-month-old ewes were anesthetized with pentobarbitone
(0.44 mg/kg of body weight) for the duration of the experiment . The
abdominal wall of each animal was opened by a mid-line incision, the
distal ileum was exteriorized, and the lumen was flushed with
phosphate-buffered saline (PBS) . Loops 9 cm in length with 1-cm
spaces were constructed by using braided surgical silk . Loop inocula
were prepared as follows . Log-phase cultures were harvested by
centrifugation and resuspended in LB broth . Approximately 109
CFU (in 5 ml of LB broth) was injected into each loop . Sterile LB
broth was used as a negative control . At 1 h postinoculation, loops
were again exteriorized, and 5 ml of PBS containing 300 µg of
gentamicin per ml was injected . The loops were returned to the
abdominal cavity, and the wound was repaired . After two further
hours, the animal was killed with an overdose of pentobarbitone, the
ileum was exteriorized, and the individual loops were cut out . The
tissue was gently washed with saline, and six circular 6-mm-radius
biopsy specimens were removed from the central area of the loop .
Each biopsy specimen was placed in 3 ml of PBS and homogenized,
and counts of viable organisms were performed on LB agar plates .
Nucleotide sequence accession numbers. The sequences
reported here were submitted to the GenBank database and assigned
accession numbers
AY502962 (strain SS44) and
AY502963 (strain 15/5) .
Prophage sequences in strains of serovar Abortusovis. Gifsy-1
and Gifsy-2 prophages are widely distributed within serovar
Typhimurium strains, and Gifsy-2-related loci have been described for
other serovars of S . enterica, including serovars Dublin,
Enteritidis, Pullorum, and Choleraesuis (3, 28) .
Here, we analyzed the distribution of sequences associated with
lambdoid prophages in two serovar Abortusovis reference strains, SS44
and 15/5 . Specific probes were derived from the recE locus,
carried by Gifsy-1 and Gifsy-2 phages of serovar Typhimurium,
and from Gifsy-2-carried orfH and stfT genes that are conserved
between the Gifsy and Fels-1 (lambdoid) phages . Southern hybridization
analysis demonstrated that these loci are absent in SS44 and
15/5 strains (data not shown) . Overall, these data suggested a lack
of lambdoid prophages related to those of serovar Typhimurium or a
loss of prophage regions in otherwise lysogenic strains . Thus, we
examined the presence of virulence genes (or genes putatively
involved in virulence) carried by Salmonella lambdoid
prophages, including gogB (Gifsy-1), sodC1 and gtgE
(Gifsy-2), and sopE (SopE
and cryptic lambdoid prophages) . Strains SS44 and 15/5 were found to
be positive only for gtgE and sodC1 (data not shown) .
These genes are the major Gifsy-2 phage-carried contributors to
virulence in serovar Typhimurium (11) . Since the
SS44 and 15/5 strains carry sodC1 and gtgE genes, we analyzed
whether a prophage equivalent to Gifsy-2 occurred in serovar
Abortusovis epidemic strains . In lysogenic strains of serovar
Typhimurium, Gifsy-1 and Gifsy-2 prophages are integrated, respectively,
within the lepA coding region (centisome 57) and between genes
pncB and pepN (centisome 24) . Analysis of the attL
and attR sequences and of the relative attachment sites on the
Salmonella chromosome (attB) allowed us to design a set
of oligonucleotides to specifically detect the insertion of prophages
at these sites (see Materials and Methods) . A first pair of primers
amplifies a fragment including the attB site and the regions
adjacent to both sides, unless a large sequence (i.e., a prophage) is
inserted . A second pair amplifies the sequence corresponding to
the junction between the chromosome and a boundary of the inserted
prophage (lysogenic state) . This method was applied to a collection
of 65 epidemic strains of serovar Abortusovis originating from Italy
(35), France (2), Albania (6),
and Iran (21) . None of the Abortusovis strains
examined carried Gifsy-1 or any other element at the lepA
site . On the other hand, these strains carried a large region between
pepN and pncB (i.e., at the location of serovar
Typhimurium Gifsy-2 phage) . Following the deletion of this region,
serovar Abortusovis strain SS44 was no longer positive for genes
sodC1 and gtgE (strain SSM2992) . Taken together, these
data indicate that serovar Abortusovis carries an element, named
Gifsy-2AO, related to serovar Typhimurium prophage Gifsy-2 . Efforts
to induce viable phage particles by exposing wild-type strains to
mitomycin C and H2O2 did not yield any plaques
on strain SSM2992 (data not shown), suggesting that Gifsy-2AO is a
cryptic prophage .
Sequence analysis of Gifsy-2AO b region. In serovar
Typhimurium, SodC1 and GtgE are the major virulence determinants
carried by Gifsy-2 (11) . However, the b region of
Gifsy-2 encodes other putative virulence proteins: SseI, GtgC, GtgD,
GtgE, and GtgF (Fig . 1A) . SseI, a type III-secreted
protein, is of particular interest since it is induced in macrophages
and is regulated by the Salmonella pathogenicity island 2-encoded
SsrB activator protein (36) . Having shown that serovar
Abortusovis Gifsy-2AO shares the integration site of serovar
Typhimurium Gifsy-2 phage and that it carries the gtgE and
sodC1 virulence genes, we examined the sequence of the Gifsy-2AO
b region to further compare the repertoires of virulence-associated
loci in the two prophages . We obtained a set of fragments
corresponding to the prophage b region and the adjacent chromosomal
DNA (pepN) from strains SS44 and 15/5 by means of arbitrary
PCR . Alignment of these sequences with those of serovar Typhimurium
strain LT2 (16) showed 99% identity from the
pepN gene up to the 5' end of gene gtgD (Fig.
1B) . Interestingly, the gtgD sequence is
interrupted by an insertion sequence with 99% identity to that of IS1414
of ETEC strain 27D (17) . As previously described,
IS1414 carries two overlapping genes: tnpA, encoding a
transposase, and, in a +1 reading frame, astA, encoding
heat-stable enterotoxin EAST1 (17) . No flanking
direct repeats were identified at the borders of the IS element .
Upstream from IS1414, the Gifsy-2AO b region showed a large
deletion (5,868 bp) encompassing the 3' end (72 bp) of gtgD,
gtgC, sseI, and the tail fiber protein genes tfaT
and stfT (Fig . 1B) . This adjacent deletion probably
originated from a replicative IS1414 transposition involving
cointegrate formation and deletion of the contiguous chromosomal
segment . This deletion was consistently found in all European
serovar Abortusovis isolates . However, strains originating from Iran
(Asia) harbored sseI within Gifsy-2AO, and only two Iranian
isolates were IS1414 positive . Cotransduction frequency analysis
of the gtgE, sseI, and sodC1 genes showed that in
Iranian serovar Abortusovis strains SSM2026 (IS1414 negative)
and SSM2046 (IS1414 positive), the order of and the distance
between the genes described above are virtually identical to those of
serovar Typhimurium strain ATCC 14028s (data not shown) . These data
suggest that the acquisition of IS1414 and the subsequent
deletion of the sseI locus occurred in serovar Abortusovis
strains that eventually become more widely distributed in European
countries .
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FIG . 1 . Gene organization within the "right" end regions of Gifsy-2
(serovar Typhimurium) and Gifsy-2AO (serovar Abortusovis) prophages .
Black arrows show genes with a role in production of phage particles,
named according to their phage lambda orthologs . Gray arrows show genes
within the b region . Sequence data are from reference 16
and this study . IR, IS1414 inverted repeated sequences.
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Gifsy-2AO plays a pathogenic role during serovar Abortusovis systemic
infection in lambs. Serovar Typhimurium strains cured of the Gifsy-2
phage are significantly attenuated after oral or intraperitoneal
inoculation of mice (7) . This important attenuation
by both routes of infection points to a role for Gifsy-2 during the
systemic phase of the infective process . To evaluate the contribution
of Gifsy-2AO to serovar Abortusovis virulence in ovines, we
determined the virulence of strain SSM3239 ( Gifsy-2AO)
in infection competition assays . One- to two-month-old lambs were
infected with an equal mixture of strain SSM3239 and wild-type strain
MA6776 . Three to 4 days later, bacteria were recovered from livers,
spleens, MLN, and intestinal walls . In i.v . infected lambs, mutant
strain SSM3239 was consistently outcompeted by the wild-type strain
in the liver, spleen, and MLN (Table 3) . However, the
two strains showed equivalent levels of colonization of the
intestinal wall . Similar results were obtained with orally infected
lambs (data not shown) . Taken together, these data suggest that the
attenuation of strain SSM3239 is due to the Gifsy-2AO contribution to
the systemic phase of infection .
TABLE 3 . Competition assays with strains SSM3239 ( Gifsy-2AO)
and MA6776 (wild type) in lambsa
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Previous studies have shown that SodC1 and GtgE are major contributors
to the virulence induced by Gifsy-2 in serovar Typhimurium (11) .
Hence, sodC1 and gtgE are likely to contribute to
Gifsy-2AO-induced virulence in serovar Abortusovis-infected lambs . To
test this hypothesis, we constructed gtgE and sodC1
mutants and tested their virulence phenotypes in competition assays
against the wild-type serovar Abortusovis strain SS44 (MA6777) . We
found that both genes contribute to virulence in lambs (Table
4) . Furthermore, a sodC1 gtgE double mutant
(SSM3474) competed evenly with the
Gifsy-2AO
mutant strain (SSM3239), suggesting that the two genes are the major
virulence determinants carried by serovar Abortusovis Gifsy-2AO
(Table 4) .
| TABLE 4 . Competition assays with sodC1 and gtgE deletion
strainsa
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To further evaluate whether Gifsy-2AO had any effect on intestinal
invasion, we made use of ovine ileal loops to quantify the invasion
of intestinal mucosa . Three hours after loop inoculation, intracellular
bacteria were enumerated by a gentamicin protection assay . The
degree of mucosal invasion of Gifsy-2AO-cured strain SSM2992 was
compared to that of wild-type strain SS44 and an invH isogenic
derivative (SSM916) . Strains SSM2992 and SS44 were recovered in
comparable numbers, demonstrating that Gifsy-2AO does not affect
intestinal invasion . In contrast, the invH mutant was
recovered in significantly lower numbers (Fig . 2) .
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FIG . 2 . Relative levels of invasiveness of S . enterica serovar
Abortusovis strains SS44 (wild type), SSM2992 ( Gifsy-2AO),
and SSM916 ( invH)
in ovine ileal loops; each bar represents the mean ± the standard error
of the mean of results from six loops tested . Three samples from each
loop were analyzed . For the results for SS44 versus those for SSM916,
the P value was <000.1.
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Multiple copies of astA are associated with epidemic strains of
serovar Abortusovis. The astA gene has been shown to be
distributed among several categories of pathogenic E . coli (18) .
Furthermore, multiple genomic copies of the gene have been observed
in ETEC strains (17) . These data have prompted us
to determine whether European isolates of serovar Abortusovis carry
other copies of this element in addition to the one carried by
Gifsy-2AO . Southern blot analysis revealed numerous restriction
fragments hybridizing with the IS1414-astA probe (Fig.
3) . The number of genomic copies and the variety of
IS1414-astA profiles, even between serovar Abortusovis strains
that are epidemically related, suggest that IS1414 can
transpose actively . In a recent study, an epidemic strain of S .
enterica serovar Agona isolated in Brazil was also found by PCR
to be astA positive (21) . In this study, we used PCR
and Southern blot analysis to identify the astA gene in 22 serovar
Agona epidemic strains isolated from pigs in Brazil . None of
the strains examined was found to be astA positive (data not
shown) . We also extended the analysis of the distribution of this
element to diverse S . enterica serovars . A collection of 63
epidemic strains belonging to 20 serovars of S . enterica
subsp . enterica and 3 epidemic strains belonging to 3 serovars
of S . enterica subsp . salamae, including those most frequently
responsible for salmonellosis worldwide (see Materials and Methods
for a list), was analyzed by PCR for the presence of the astA
or IS1414 element . Our results showed that none of these strains
was astA positive .
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FIG . 3 . Southern blot hybridization of serovar Abortusovis epidemic
strains with the IS1414 (astA) probe . Multiple genomic
copies of IS1414 (astA) were detected in the chromosomes
of serovar Abortusovis epidemic isolates from Albania (strains SSM0074
[lane 1] and SSM0075 [lane 2]), Sardinia (strains SSM0078 [lane 3],
SSM0088 [lane 4], and SSM0096 [lane 5]), Iran (strains SSM2045 [lane 6],
SSM2046 [lane 7], SSM2026 [lane 8], and SSM2027 [lane 9]), and Russia
(strain SSM0041 [lane 10]) . Serovar Typhimurium strain ATCC 14028s (lane
11) and ETEC strain SSM3422 (lane 12) were used as negative and positive
controls, respectively.
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Phage-mediated transfer favors the reassortment of effector proteins
in epidemic strains of Salmonella spp . Under laboratory
conditions, the lysogeny of phages carrying virulence genes occurs
efficiently, even in strains from different S . enterica
serovars (8, 25, 37),
suggesting that required host factors are conserved (i.e., Gifsy-1
and Gifsy-2 receptor protein OmpC) (12) . In
addition, the exchange of gene cassettes (morons) between unrelated
phages might have further increased the efficiency of gene transfer
among the broad variety of S . enterica serovars (20) .
However, phage-carried genes for virulence effectors show a variable
distribution among strains of Salmonella . Such divergence may
be related to the evolution of bacterial fitness within diverse
biological niches . In this context, phage-mediated acquisition of a
specific virulence effector by a large group of S . enterica
serovars would imply a beneficial effect on a common pathogenic step
(i.e., survival against macrophage cytotoxicity) . In agreement with
this hypothesis, the acquisition of Gifsy-2-encoded SodC1, a
superoxide dismutase induced in macrophages and required during
systemic infection in mice, is associated with highly virulent
serovars causing extraintestinal infections (4,
5, 28, 32) .
In all S . enterica serovars analyzed so far, sodC1-positive
serovars also harbor Gifsy-2-carried sseI and gtgE genes,
and with the exception of serovar Typhi (sodC1 and gtgE
negative; sseI positive) and European isolates of serovar
Abortusovis (sodC1 and gtgE positive; sseI
negative), the three genes always occur together (S . Uzzau and G .
Falchi, unpublished observations) . The lack of sodC1 and
gtgE virulence genes in serovar Typhi is not surprising, since in
this pathogen, which occurs only in humans, a number of functions
involved in host interaction have been inactivated, probably as part
of its adaptation toward a very narrow ecological niche (24) .
Overall, these data strongly suggest that Gifsy-2-related prophages
are widely distributed in highly virulent S . enterica serovars
and that they share an ancestor phage . Evolutionary selection of such
lysogens might have been driven by their enhanced potential to cause
systemic diseases .
The data presented here confirm and extend these results . We
identified a cryptic prophage, Gifsy-2AO, consistently associated
with serovar Abortusovis epidemic strains . Sequence analysis showed
that this element is located at the same attB site as serovar
Typhimurium Gifsy-2 (i.e., between pepN and pncB) and
that it carries both the sodC1 and gtgE virulence genes . The
deletion of Gifsy-2AO reduces extraintestinal infection 10- to
100-fold in oral and intraperitoneal mixed infections in lambs . In
contrast, Gifsy-2AO showed no significant contribution to intestinal
invasion in lambs as measured by an ileal loop assay (3 h
postinfection) and a competition assay (3 to 4 days postinfection) .
Lysogenic conversion by Gifsy-2-related prophages, therefore, appears
to be associated with the enhancement of systemic virulence in
serovars of S . enterica . Our data also showed that gtgE
and sodC1 contribute to the Gifsy-2AO-encoded virulence of
serovar Abortusovis in ovines . These results are consistent with
findings from previous studies demonstrating that SodC1 and GtgE are
the major contributors to virulence induced by Gifsy-2 during
serovar Typhimurium infection in mice (11) .
Following the horizontal acquisition of IS1414 (possibly from
a pathogenic E . coli strain), a number of serovar Abortusovis
genomic loci, including Gifsy-2AO, have been targeted by this
insertion element . Strikingly, all European isolates of serovar
Abortusovis showed an IS1414-dependent deletion of the sseI
gene . Given the fact that these strains originate from areas
where serovar Abortusovis is endemic (i.e., Sardinia, Italy, and
Albania), the lack of TTSS-translocated effector SseI does not appear
to have reduced the fitness of this serovar as an ovine pathogen .
Studies from different laboratories failed to identify the role of
SseI in virulence in animals (8, 19,
36) . While we cannot rule out a pathogenic role
for SseI, our data suggest that this TTSS-translocated effector may
have a small impact on serovar Abortusovis infection and persistence
in ovines . In addition to the SseI gene, we were unable to identify
in strains of serovar Abortusovis a number of other phage-carried
genes previously described for other pathogenic serovars (see
Results for a list) . Adaptation to a unique animal species (ovines)
may have required the maintenance of a limited number of effectors
and strategies compared to those of broad-host-range serovars like
serovar Typhimurium .
IS1414 has been previously identified in an ETEC strain (17) .
This IS carries two overlapping genes encoding a transposase (tnpA)
and EAST1 (astA), a heat-stable toxin . To our knowledge, the
presence of IS1414 in serovar Abortusovis represents a unique
example of intergeneric horizontal transfer of a virulence gene (astA)
via a transposable element . The analysis of the Gifsy-2AO b region
clearly showed that the insertion of IS1414 may give rise to
adjacent deletions, possibly via a replicative transposition
mechanism . The acquisition of IS1414 appears to be relatively
recent, since a number of epidemic strains isolated in Iran carry
sseI within the Gifsy-2AO element and are negative for IS1414 .
The potential relevance of this element in serovar Abortusovis
pathogenicity is unclear . IS1414 encodes EAST1, a virulence
marker of pathogenic E . coli whose association with pathogenicity
is a matter of controversy (18) . Savarino et al . have
clearly demonstrated that EAST1 is structurally related to E . coli
Shiga toxin and that it shares the Shiga toxin function of binding
membrane-associated guanylate cyclase, causing an intracellular
increase of cyclic GMP (29) . Yet there is no evidence of
EAST1-dependent fluid secretion in animal studies (17)
or of an association of EAST1 with epidemic strains of E . coli
with high diarrheagenic potential (18) . The
clarification of EAST1's contribution to host interaction will
require further studies . However, the very frequent transposition of
IS1414 may provide, by itself, plasticity to the chromosome
and the selection of novel virulence forms in serovar Abortusovis .
We are grateful to Valentino Petruzzi for assistance in ligated ileal
loop experiments .
This work was financially supported by grants from the Cofin-2000
National Research Program "Mechanisms of pathogenicity of intracellular
bacteria" and the Cofin-2002 National Research Program "Virulence
determinants of intracellular bacteria" from MURST (Ministero
dell'Universitŕ e della Ricerca Scientifica e Tecnologica, Italy),
and by grant Ricerca Corrente, IZSSAO11/99, from Ministero della
Salute, Italy .
* Corresponding author . Mailing address: Dipartimento di
Scienze Biomediche, Universitá di Sassari, Viale San Pietro 43/b, 07100 Sassari,
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