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Journal of Bacteriology, January 2004, p . 366-373, Vol . 186,
No . 2
Phage
Shock Protein PspA of Escherichia coli Relieves Saturation of Protein
Export via the Tat Pathway
Matthew P . DeLisa,1,2 Philip Lee,3 Tracy
Palmer,3 and George Georgiou1,2,4*
Department of Chemical Engineering,1 Institute for Cell and
Molecular Biology,2 Department of Biomedical Engineering, University
of Texas, Austin, Texas 78712,4 Department of Molecular Microbiology,
John Innes Centre, Norwich, Norfolk NR4 7UH, United Kingdom3
Received 15 July 2003/ Accepted 10 October 2003
Overexpression of either heterologous or homologous proteins that are
routed to the periplasm via the twin-arginine translocation (Tat)
pathway results in a block of export and concomitant accumulation of
the respective protein precursor in the cytoplasm . Screening of a
plasmid-encoded genomic library for mutants that confer enhanced
export of a TorA signal sequence (ssTorA)-GFP-SsrA fusion protein,
and thus result in higher cell fluorescence, yielded the pspA
gene encoding phage shock protein A . Coexpression of pspA
relieved the secretion block observed with ssTorA-GFP-SsrA or upon
overexpression of the native Tat proteins SufI and CueO . A similar
effect was observed with the Synechocystis sp . strain PCC6803
PspA homologue, VIPP1, indicating that the role of PspA in Tat export
may be phylogenetically conserved . Mutations in Tat components that
completely abolish export result in a marked induction of PspA
protein synthesis, consistent with its proposed role in enhancing
protein translocation via Tat .
Secretion of proteins across lipid bilayer membranes is a process
fundamental to life . The bacterial general secretory (Sec) pathway
and its eukaryotic counterpart are responsible for the membrane
translocation of the majority of secreted proteins . However, 6 years
ago a fundamentally different pathway for protein translocation was
discovered, first in plants and then in bacteria . In the latter
organisms, the new pathway was termed the twin-arginine translocation
(Tat) pathway because of the signature RR dipeptide found in most of
the leader peptides of proteins that use this mode of export (5) .
A combination of biochemical and genetic studies has identified the
key features that distinguish the Tat pathway from the Sec mechanism
of protein export . (i) The Tat pathway is able to transport proteins
that have attained a substantial degree of tertiary or even
quaternary structure in the cytoplasm prior to export (16,
33, 34) . (ii) The Tat
translocase consists of the Tat(A/E)BC proteins, which are completely
distinct and share, at most, little homology with the components of
the Sec translocon (SecYEG) (7) . (iii) Tat-specific leader
peptides possess a number of significant differences relative
to Sec sorting signals (6, 7,
13) . (iv) Whereas the translocation of proteins by the Sec
pathway requires ATP hydrolysis, the Tat pathway is solely dependent
on the proton motive force,
µH+
(26, 28) .
Recently, in vitro translocation assays with purified (inverted)
inner membrane vesicles from Escherichia coli were developed
by Yahr and Wickner (47) and independently by Alami et al . (2) .
It was shown that disruption of the H+ gradient abolishes
export whereas ATP has little effect . Moreover, Alami et al . showed
that functional membrane association of a Tat precursor with
the Tat apparatus requires an intact Arg-Arg signal but is independent
of the H+ gradient . However, these groups reported that
translocation of SufI could not be observed in inside-out inner
membrane vesicles prepared from wild-type (WT) E . coli cells .
Translocation could only be detected in membrane vesicles that had
been prepared from cells overexpressing TatABC from a strong T7
promoter, and even under these conditions, the efficiency was low .
The same authors also reported that the precursor proteins became
translocation incompetent as a function of time, a rather peculiar
finding for a dedicated posttranslational pathway . For nearly
all heterologous protein fusions to Tat leaders, e.g., green
fluorescent protein (GFP) (15, 16,
41), chloramphenicol acetyltransferase (40),
and even certain native Tat substrates (11, 24),
the efficiency of export in vivo is also well below 100% . As a
result, upon subcellular fractionation, a sizable fraction of the
preprotein is retained in the cytoplasm . For example, with ssTorA-GFP
fusions, about 50% of the preprotein is found in the spheroplast
fraction of exponential-phase cells (4,
41) .
Collectively, these observations suggest that while Tat(A/E)BC are
the only essential components of the translocon, factors other than
these proteins might help maintain export competence and/or enhance
translocation efficiency in vivo . This would be analogous to the Sec
pathway, where soluble (e.g., SecB) and membrane (SecD and SecF)
proteins play distinct roles in the secretion process but do not
represent essential components of the translocon (18) .
To date, the only auxiliary factors found to affect Tat transport are
substrate-specific chaperones such as DmsD (29) .
DmsD binds to the leader peptides of precursor DmsA and TorA but not
to mature DmsA and TorA . On the basis of this observation, a dual
role for this chaperone was initially proposed in which DmsD assists
in molybdopterin cofactor attachment and guides the preprotein to the
translocation channel (29, 35) .
While DmsD is found associated with the inner membrane through an
interaction with TatB and TatC (30), it is not required
for efficient translocation of a DmsA signal peptide-GFP chimera
or the authentic Tat substrate TorA (32) . Thus, it
appears that DmsD is a substrate-specific chaperone that does not
play a generalized role in Tat pathway transport efficiency .
We have developed a genetic system for the isolation of multicopy
E . coli genes that enhance the export of Tat substrate proteins
in vivo . As was discussed above, a significant portion of ssTorA-GFP
remains in the cytoplasm in a folded, fluorescent conformation .
Fusion of an SsrA C-terminal extension to ssTorA-GFP results in the
degradation of export-incompetent cytoplasmic protein . Therefore, in
cells expressing ssTorA-GFP-SsrA, only protein that is exported from
the cytoplasm via the Tat pathway is rescued from degradation and
contributes to cell fluorescence (15) . We sought
to isolate chromosomal genes that confer enhanced cell fluorescence,
and thus improved Tat export, when expressed from a multicopy
plasmid . A gene fragment encoding phage shock protein A (pspA)
was found to markedly increase the export efficiency of not only
TorA-GFP-SsrA but also native Tat protein substrates (SufI, CueO)
that accumulate in an export-incompetent form when expressed from
multicopy plasmids . A similar effect was observed with the
Synechocystis sp . pspA homologue, VIPP1, indicating that
the role of PspA in Tat export may be phylogenetically conserved .
Finally, we show that mutations in Tat components that completely
abolish export result in a marked induction of PspA synthesis .
The pspA gene is the first gene in the pspABCDE operon that
is induced upon infection by filamentous phage and numerous
other stresses . pspA encodes a 26-kDa polypeptide that is approximately
equally distributed between the cytoplasm and the inner membrane
fraction (9) . The PspA protein exhibits multiple
functions . First, it serves as a negative regulator of
transcriptional enhancer protein PspF, and thus, it negatively
regulates its own expression (25) . Second, PspA
assists in maintenance of the proton motive force, which is thought
to help the cell cope with membrane-related stresses (i.e., osmotic
shock, lipid depletion, and blockage of the Sec pore) (21,
25) . Most importantly, the transport of various
Sec pathway precursors is less efficient in vivo and in vitro in the
absence of PspA while expression of the pspA gene stimulates
efficient Sec protein export (22) . In accordance,
its role in protein secretion and
µH+
maintenance may be a direct result of its association with the inner
membrane .
Bacterial strains, plasmids, and growth conditions. The
bacterial strains and plasmids used in this study are described in
Table 1 . E . coli strain XL1-Blue (recA1 endA1 gyrA96
thi-1 hsdR17 supE44 relA1 lac [F' proAB lacIqZ M15Tn10
(Tetr)]) was used for screening of the genomic library by
fluorescence-activated cell sorter (FACS) . Plasmids pSufI-FLAG and
pCueO-FLAG were constructed by PCR amplification of E . coli
K-12 genomic DNA with primers SufI-For
(5'-GCGATGGAGCTCTTAAAGAGGAGAAAGGTCATGTCACTC AGTCGGCGT-3') and
SufI-Rev (5'-GCTCTAGATTATCCCTTGTCGTCATCGTCC
TTGTAGTCTGCTCCCGGTACCGGATTGACCAA-3') and primers CueO-For
(5'-GCGATGGAGCTCTTAAAGAGGAGAAAGGTCATGCAACGTCGTGATTTC-3') and CueO-Rev
(5'-GCTCTAGATTATCCCTTGTCGTCATCGTCCTTGT AGTCTGCTCCTACCGTAAACCCTAACAT-3'),
where the sequence for the FLAG affinity tag was incorporated
into the reverse primers . PCR products were digested with SacI
and XbaI and ligated into the same sites of pBAD33 . Plasmids
pVipp1 and pV-236 were constructed by PCR amplification of Synechocystis
sp . strain PCC6803 genomic DNA with primers Vfor
(5'-GCGGCGTCATGATAGGATTATTTGACCGTTTAGGC-3') and either Vrev
(5'-GCGGCGCCCGGGTTATCCGTGATG GTGATGATGATGTGCTCCCAGATTATTTAACCGACG-3')
or V236rev (5'-GCGGCGCCCGGGTTAAGAGGTTCCCGGTAATGC-3') . PCR products
were digested with BspHI and HindIII and ligated into the same
sites of pTrc99 . All plasmid constructs were confirmed by sequencing .
| TABLE 1 . Strains and plasmids used in this study
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Cultures were routinely grown aerobically at 30°C in Luria-Bertani
(LB) medium, and antibiotic selection was maintained at the following
concentrations, as required: ampicillin, 100 µg/ml; chloramphenicol,
25 µg/ml; kanamycin, 50 µg/ml . Protein synthesis was induced by
adding isopropyl-ß-D-thiogalactopyranoside
(IPTG; 0.1 mM) and/or arabinose (0.2%) when the cells reached an
optical density at 600 nm of
0.5 .
Generation of a genomic library and library screening. A
library of random 2- to 3-kbp genomic fragments was constructed by
digestion of XL1-Blue genomic DNA with Sau3AI, gel purification
of the 2- to 3-kbp products, and ligation into the BamHI site
of plasmid pTrc99 (Amersham Biosciences) . The ligation products
were transformed into XL1-Blue cells carrying pTGS (15) and
plated on LB agar containing 0.2% glucose and ampicillin and
chloramphenicol at the concentrations indicated above . The resulting
cell library (>105 clones) was harvested from plates and
subcultured directly into liquid LB medium containing the appropriate
antibiotics . Cells were grown at 30°C until mid-log phase (optical
density at 600 nm,
0.5),
and synthesis of ssTorA-GFP-SsrA and of polypeptides encoded within
genomic DNA inserts was induced with arabinose and IPTG,
respectively . Following 3 h of induction, the cells were washed once
with phosphate-buffered saline and a 5-µl aliquot was diluted into 1
ml of phosphate-buffered saline and labeled with propidium iodide for
flow cytometric detection of nonviable cells (14) .
FACS sorting was performed with a Becton-Dickinson FACSort, and the
desired cell population was gated by setting appropriate SSC, FL1,
and FL2 windows (side scatter is used to trigger the cell events,
whereas FL1 is used to monitor GFP fluorescence and FL2 is used to
monitor propidium iodine fluorescence) . Typically, ca . 3
x 106 cells were examined
in 30 min and 250 to 1,000 events were collected . The collected
solution was sterilely filtered (0.45-µm pore size; Millipore), and
the filters were placed on LB medium plates with ampicillin and
chloramphenicol . After 12 h of incubation at 30°C, individual
colonies were inoculated into LB medium with ampicillin and
chloramphenicol in triplicate 96-well plates . Following 12 h of
growth at 30°C, cells were similarly subcultured in triplicate into
96-well plates containing LB medium with ampicillin, chloramphenicol,
0.1 mM IPTG, and 0.2% arabinose and grown for 6 h at 30°C . Individual
clones were screened via flow cytometry and on a fluorescent plate
reader (Bio-Tek FL600; Bio-Tek Instruments, Winooski, Vt.) for
verification of the fluorescent phenotype .
Cell fractionation. Periplasmic and spheroplast fractions
were prepared by subjecting equivalent amounts of cells to the
lysozyme-EDTA-cold osmotic shock procedure (31) .
The resulting spheroplasts were resuspended in 10 ml of TE (10 mM
Tris-Cl [pH 7.5], 2.5 mM Na-EDTA) and lysed by sonication, and intact
cells and cellular debris were removed by centrifugation (5 min at
10,000 x g) . Lysed spheroplasts,
including soluble and insoluble fractions, were diluted in sodium
dodecyl sulfate-polyacrylamide gel electrophoresis buffer and
subjected to electrophoretic analysis, or alternatively, they were
centrifuged and the supernatant was retained as the soluble
cytoplasmic fraction . For isolation of membrane fractions, the lysate
of E . coli cells was centrifuged at 27,000 x
g for 20 min at 4°C . The membrane fraction was obtained by
further centrifugation of the 27,000 x
g supernatant at 100,000 x g
for 1 h at 4°C . The supernatant was carefully removed, and the
membranes were gently resuspended in morpholinepropanesulfonic acid
(MOPS) buffer (50 mM, adjusted to pH 8.0 with KOH) containing 5 mM
ß-mercaptoethanol and 10 mM MgCl2 at a protein
concentration of 20 mg/ml . Protein concentrations were determined
with a Bio-Rad protein assay reagent kit with bovine serum albumin as
the standard . ß-Galactosidase activity was used as a cytoplasmic
marker of fractionation efficiency (17) . Only data
from fractionation experiments in which
95%
of the ß-galactosidase activity was in the cytoplasmic fraction
are reported . To analyze total cellular proteins, collected cells
were resuspended in TE and homogenized in a French press cell
(Carver) at 20,000 lb/in2 .
Western blotting analysis. Western blotting was performed as
described previously (12) . The following primary
antibodies were used: polyclonal rabbit anti-PspA (gift from J .
Tommassen), monoclonal mouse anti-GFP (Clontech) diluted 1:5,000,
monoclonal mouse anti-FLAG (Sigma) diluted 1:3,000, polyclonal rabbit
anti-SufI (10) diluted 1:3,000, monoclonal rabbit
anti-DsbC (gift from John Joly, Genentech) diluted 1:10,000, and
monoclonal rabbit anti-GroEL (Sigma) diluted 1:10,000 . The secondary
antibody was 1:10,000 goat anti-mouse-horseradish peroxidase or goat
anti-rabbit-horseradish peroxidase . Membranes containing fractionated
samples were first probed with anti-GFP, anti-FLAG, or anti-SufI
antibodies and then, following development, stripped in Tris-buffered
saline-2% sodium dodecyl sulfate-0.7 M ß-mercaptoethanol . Stripped
membranes were reblocked and probed with anti-DsbC and anti-GroEL
antibodies simultaneously . Relative band intensities of Western blots
were calculated with ImageJ v1.29, which was obtained from http://rsb.info.nih.gov/ij/ .
FACS-based isolation of multicopy E . coli genes that enhance Tat
secretion. Earlier we had shown that the whole-cell fluorescence of
XL1-Blue cells expressing ssTorA-GFP-SsrA is determined by the amount
of protein exported to the periplasmic space by the Tat apparatus
(15) . Since a portion of ssTorA-GFP-SsrA is export
incompetent and remains in the cytoplasm, where it is degraded, we
reasoned that genes capable of enhancing export would increase the
amount of protein that is sequestered in the periplasm . As a result,
a larger fraction of GFP-SsrA would be rescued from degradation
and therefore confer increased cell fluorescence . Cells containing a
pBAD33-based plasmid expressing the ssTorA-GFP-SsrA gene (15)
were cotransformed with an E . coli genomic DNA library consisting
of 2- to 3-kbp fragments of insert DNA ligated into plasmid
pTrc99 . About 105 independent transformants were grown in liquid
culture, and synthesis of ssTorA-GFP-SsrA and the polypeptides
encoded within the genomic fragment inserts was induced by arabinose
and IPTG, respectively . Clones conferring increased fluorescence
(relative to cells cotransformed with the empty vector) were isolated
by FACS . Highly fluorescent clones were isolated, and the gene
inserts responsible for the increase in fluorescence were identified
by DNA sequencing . Two independent clones that exhibited about
fourfold higher whole-cell fluorescence contained genomic fragments
that included the entire pspA gene . To further study the role
of this gene, we amplified E . coli pspA by PCR and cloned it
into pTrc99 downstream from the Trc promoter . Synthesis of
ssTorA-GFP-SsrA and PspA was induced by arabinose and IPTG,
respectively, and 3 h later, cell fluorescence was determined by flow
cytometry . The mean fluorescence (M) of cells expressing PspA (M =
198) was ca . fourfold greater than that of control cells transformed
with the empty vector (M = 52; Fig . 1A) . The amount
of ssTorA-GFP-SsrA in the osmotic shock fraction of cells
coexpressing PspA was determined by Western blotting . In these
experiments, efficiency of fractionation was evaluated by examining
the distribution of periplasmic enzyme DsbC between the osmotic shock
(periplasmic) and spheroplast fractions (Fig . 1B) .
Further, >95% of the ß-galactosidase activity was localized within
the spheroplast fraction, indicating a negligible amount of cell
lysis during cell fractionation . Consistent with the FACS data,
expression of PspA from pPspA resulted in an approximately fourfold
increase in the intensity of the GFP-SsrA band in the osmotic shock
fluid but not in the cytoplasmic fraction (Fig . 1B) .
Furthermore, only a very low level of intact ssTorA-GFP-SsrA was
found within the soluble fraction of lysed spheroplasts, consistent
with the expected degradation of the protein by the Clp machinery .
Examination of intact spheroplasts, consisting of the soluble
components and the inner membrane, revealed the presence of an
appreciable amount of ssTorA-GFP-SsrA . Isolation of the membrane
fraction further confirmed that the ssTorA-GFP-SsrA intact
spheroplast fraction is indeed membrane associated and nonfluorescent
(data not shown) . Evidently, the membrane-associated protein is
present in a form that is not fully folded and is protected from
degradation by ClpXP . A similar accumulation of inactive ssTorA-GFP
(expressed without an SsrA tag) in the membrane fraction was also
reported by Barrett et al . (4) . Coexpression of
PspA resulted in a reduction in the amount of membrane-associated
ssTorA-GFP-SsrA (Fig . 1C) . Densitometric analysis
of the protein band in intact spheroplasts with and without PspA
expression revealed a fourfold greater amount in the latter samples .
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FIG . 1 . (A) FACS histograms of cells coexpressing TorA-GFP-SsrA with the
pspA gene, which confers an increase in Tat transport of GFP-SsrA
to the periplasm . Mean cell fluorescence (M) is given for the genes
isolated from a genomic library and for the negative control (pTrc99) .
All reported values of M are the average of three replicate experiments
where each sample was assayed in triplicate (n = 9; standard
error, <5%) . (B) Western blot assay comparing GFP-SsrA transport in
cells coexpressing pspA from pPspA to that in negative control
cells (pTrc99), where osmotic shock (Per), soluble spheroplast (Sol
Cyt), and (C) intact spheroplast (Sph) fractions are shown . Identical
levels of total protein from the osmotic shock and spheroplast fractions
were loaded per lane . DsbC and GroEL confirmed that equivalent amounts
of periplasmic protein were loaded per lane . The quality of all
fractionations was confirmed by ß-galactosidase activity assays (see
Materials and Methods).
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We next determined whether deletion of the pspA gene affected
the translocation of ssTorA-GFP-SsrA via the Tat pathway . E . coli
strain L2 (pspA::kan) exhibited 50% lower fluorescence
relative to its isogenic parent strain, L1 (Fig . 2A) .
Transformation of E . coli L2 (pspA::kan) with
pPspA, followed by induction of protein synthesis by IPTG, resulted
in a fluorescence signal comparable to that obtained with the
parental strain under the same conditions . Consistent with these
results, Western blot analysis showed that in the pspA mutant
background, the level of GFP-SsrA in the osmotic shock fraction was
approximately threefold (based on densitometry) lower than that in
the control (Fig . 2B) and that this was accompanied
by a proportional increase in the amount of ssTorA-GFP-SsrA in intact
spheroplasts . In contrast to these results, deletion of pspBC
and pspF did not have any effect on the export efficiency of
the GFP-SsrA fusion protein (data not shown) .
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FIG . 2 . (A) FACS histograms of cells expressing TorA-GFP-SsrA in WT
cells (i), pspA mutant cells (pspA::kan) (ii), WT
cells coexpressing pspA from pPspA (iii), and pspA::kan
cells coexpressing pspA from pPspA (iv) . M refers to mean cell
fluorescence in all cases . All reported M values are the average of
three replicate experiments in which each sample was assayed in
triplicate (n = 9; standard error, <5%) . (B) Western blot assay
comparing GFP-SsrA transport in WT cells with that in pspA mutant
cells . Identical levels of total protein from the osmotic shock (Per)
and intact spheroplast (Sph) fractions were loaded per lane . GroEL
Western blot assay confirmed the quality of cell fractionations and also
that equivalent amounts of proteins from the total spheroplast fraction
were loaded per lane.
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Efficiency of protein export through the Tat pathway in vivo and in
vitro is enhanced when inner membrane vesicles are prepared from
cells in which the Tat translocon components TatABC have been
expressed from a strong promoter (37, 47) .
Western blot analysis revealed no difference in the level of TatA,
TatB, or TatC in cells containing pPspA and induced with IPTG
relative to that in cells transformed with the empty vector (data not
shown) . Thus, PspA affects Tat export by a process that does
not involve induction of Tat protein synthesis .
PspA enhances export of overexpressed endogenous Tat substrates.
We examined the effect of pspA on the export of the well-characterized
endogenous E . coli Tat substrate SufI (39) .
Recently, Chanal et al . reported that overproduction of SufI leads to
the saturation of its own transport but has no effect on other Tat
substrates (11) . Consistent with this observation,
we confirmed that in cells expressing a FLAG-tagged version of SufI
from a multicopy plasmid, an appreciable amount of pre-SufI remains
in the spheroplast fraction (Fig . 3A) . A similar
result was obtained in cells expressing native SufI without a FLAG
tag, indicating that the presence of the C-terminal eight-amino-acid
epitope does not have any effect on the efficiency of export (data
not shown) . We also found that the export of a second Tat substrate,
the copper chaperone CueO, is also saturated when the protein is
overproduced .
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FIG . 3 . Western blot analysis of SufI (A) or CueO (B) transport in cells
coexpressing pspA relative to control cells (pTrc99) . Identical
levels of total protein from osmotic shock (Per) and intact spheroplast
(Sph) samples were loaded per lane . Western blot assays were used to
compare SufI (C) and CueO (D) transport in WT and pspA mutant
cells . (E) Chromosomal SufI levels in WT and pspA mutant cells .
DsbC and GroEL served as quantitation markers and confirmed the quality
of fractionations . The quality of all fractionations was also confirmed
by ß-galactosidase activity assays (see Materials and Methods).
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Coexpression of PspA increased the accumulation of both SufI and CueO
in the periplasmic fraction (50 and 100%, respectively) with a
concomitant reduction in the amounts of pre-SufI and pre-CueO in
intact spheroplasts (Fig . 3A and B) . As was the
case with ssTorA-GFP-SsrA, PspA specifically caused a reduction in
the amount of insoluble, presumably membrane-bound, pre-SufI and
pre-CueO (data not shown) . Finally, consistent with the results shown
in Fig . 2B, the efficiency of export of both SufI
and CueO was severely reduced in the pspA mutant strain of E .
coli (Fig . 3C and D) .
SufI synthesized from its own promoter from the chromosomal gene
was fully exported into the periplasm, and no precursor accumulation
was observed in the intact spheroplast fraction . Similarly, no
accumulation of pre-SufI was observed in a pspA background
(Fig . 3E) . This result indicates that PspA affects
the localization of Tat substrate proteins only when export has
become saturated, as was the case when ssTorA-GFP-SsrA, SufI, and
CueO were expressed at high levels .
PspA is induced in Tat mutants. Induction of PspA synthesis
has been shown to occur in response to a variety of membrane
stresses, including osmotic shock, filamentous phage infection,
jamming of the Sec apparatus (25), and most
recently, upon depletion of inner membrane protein YidC, which is
involved in the membrane integration of membrane-spanning
-helices
(42) . Given the effect of PspA on the export of Tat
substrates described above, it was of interest to examine whether
partial or complete blockage of Tat export also results in induction
of PspA . Cells carrying mutations that block Tat export completely
(tatB, tatC, tatAE, and tatABCDE) exhibited
markedly higher levels of PspA protein (Fig . 4A) .
Interestingly, the
tatA
mutant had somewhat lower induction of PspA synthesis, which is
consistent with the fact that Tat export is not completely abolished
in that strain (36) . The tatA homologue
tatE is expressed at a low level in E . coli and so far has
not been found to significantly affect the export of any of the Tat
proteins tested (36) . Consistent with this
observation, induction of PspA did not occur in the
tatE
mutant strain . Overexpression of SufI exacerbated the effect of
mutations in the tat genes (Fig . 4B) . Notably, in
tatA
mutant cells, expression of SufI resulted in a more dramatic increase
in the level of PspA, reaching about 60% of that observed in
the tatABCE mutant carrying a complete deletion of the Tat apparatus .
Once again, no induction of PspA was observed in
tatE
cells . Expression of SufI alone in WT cells did not result in a
higher level of PspA (compare Fig . 4A and B),
indicating that the limited blockage of Tat export that occurs under
these conditions (11) is not sufficient for
induction of PspA synthesis . Similarly, neither (i) expression of
SufI carrying an RR KK
mutation in the leader peptide that completely abolishes export (39)
nor (ii) fusion of a Tat signal sequence (ssTorA) with alkaline
phosphatase (ssTorA-AP), which was previously shown to be misfolded
and export incompetent (16), resulted in induction of
PspA (Fig . 4C) . The latter result is particularly
noteworthy because expression of reduced, nonexported ssTorA-AP
partially blocks the export of both SufI and CueO (M . P . DeLisa and
G . Georgiou, unpublished data), yet this effect was not sufficiently
strong to cause PspA induction . Thus, an increase in PspA synthesis
is only caused by mutations that abolish export nearly completely .
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FIG . 4 . Western blot analysis of PspA protein levels probed in the WT
and six different tat mutant strains (A) . (B) Same as panel A,
but all cells carried pSufI-FLAG and were induced to express full-length
SufI . An equivalent number of cells was loaded per lane, and GroEL
served as a quantitation marker . (C) PspA protein levels in WT cells
expressing the empty-vector control (pTrc99; lane 1), SufI carrying an
RR KK
mutation in the leader peptide in pTrc99A (lane 2), and TorA-AP in
pTrc99 (lane 3).
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The VIPP1 plant homologue enhances Tat export and complements the
export defect of pspA null mutants. The VIPP1 protein found in
photosynthetic bacteria and plant chloroplasts has homology with
bacterial PspA . Interestingly, the occurrence of PspA and/or VIPP1 is
closely linked to the occurrence of the Tat system, with both present
in plant chloroplasts, archaea, and bacteria but notably lacking in
mycoplasma and mammals (46, 48) .
In Arabidopsis thaliana, disruption of the VIPP1 gene
has detrimental effects on the plant's ability to form properly
structured thylakoids and to carry out photosynthesis (23) .
To examine whether the function of VIPP1 is phylogenetically
conserved, we tested for the ability of VIPP1 to substitute for the
E . coli pspA-encoded mutant protein . The VIPP1 gene was
amplified from Synechocystis sp . strain PCC6803 genomic DNA
and cloned into pTrc99 with a C-terminal histidine tag for detection .
Cells transformed with pTrc99 VIPP1 and induced with IPTG
produced a protein of the expected molecular weight that, similar to
PspA, was localized both in the cytoplasm and in intact spheroplasts
(data not shown) . The presence of VIPP1 resulted in increased
periplasmic accumulation of ssTorA-GFP-SsrA to a degree comparable to
that observed when PspA was expressed in a similar manner (compare
Fig . 5A with 1B) . It has been postulated that the
C-terminal extension that discriminates VIPP1 proteins from PspA is
important for its function in thylakoid formation (44) .
Therefore, the C-terminal domain would be unlikely to have a role in
the stimulation of Tat export in E . coli . Consistent with this
hypothesis, a truncated version of VIPP1 (V-236) was coexpressed with
ssTorA-GFP-SsrA and found to enhance periplasmic accumulation of
GFP-SsrA at a level only slightly lower than that observed for
full-length VIPP1 (Fig . 5A) . Thus, only amino acids
1 to 236 of VIPP1 are required in order to relieve the saturation of
Tat export caused by overexpression of translocation-competent
substrate proteins . In addition, both full-length VIPP1 and V-236
were able to restore the export of ssTorA-GFP-SsrA in E . coli pspA
mutant cells to the level observed in WT cells, conferring WT levels
of cell fluorescence (data not shown) .
|
FIG . 5 . Effects of VIPP1 and V-236 on export of GFP-SsrA . (A) Western
blot analysis of the periplasmic fraction from WT cells coexpressing
TorA-GFP-SsrA and either the empty pTrc99 vector (lane 1), full-length
VIPP1 (lane 2), or a truncated version of VIPP1 (V-236; lane 3) . Western
blot analysis of SufI (B) or CueO (C) transport in WT cells coexpressing
VIPP1 from pTrc99 relative to that in control cells carrying empty
pTrc99 . DsbC and GroEL served as quantitation markers and confirmed the
quality of fractionations . The quality of all fractionations was also
confirmed by ß-galactosidase activity assays (see Materials and
Methods).
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VIPP1 was also able to relieve the export saturation observed upon
overexpression of the native substrates SufI and CueO . As shown in
Fig . 5B and C, VIPP1 restored the export efficiency
of both proteins to nearly 100% . Rather remarkably, in separate
studies, we found that purified E . coli PspA was able to stimulate
the in vitro chloroplast Tat-mediated export of proteins across
the thylakoid membrane of Pisum sativum in a protein
concentration-dependent manner (J . V . Perea and S . M . Theg,
unpublished data) . This result indicates that bacterial PspA exerts
an effect on the export of proteins via the plant equivalent of the
Tat system, possibly by supplementing the function of native VIPP1 .
Extensive in vitro and in vivo studies have clearly established that
Tat(A/E)BC are the only essential components of the Tat translocon .
However, several lines of evidence indicate that, in addition to the
Tat proteins, other cellular components can affect the export
process . In vitro, the efficiency of protein translocation into
membrane vesicles is typically at least an order of magnitude lower
than that observed in the cell (47) . Export
efficiency can be increased by preparing membrane vesicles from cells
that overexpress the Tat proteins, but even under these conditions,
translocation proceeded at an efficiency of only about 20% . In vivo,
the export of a number of heterologous proteins and endogenous Tat
substrates becomes saturated when their expression is elevated (4,
11, 16) . In part, this saturation
of export might be related to the energetic requirement of Tat
translocation . Alder and Theg recently reported that the cost of in
vitro cpTat protein transport in the plant thylakoid is the energetic
equivalent of approximately 104 ATP molecules per molecule
transported, a value that represents almost 3% of the total energy
output of the chloroplast (3) . If indeed the
energetic cost for protein translocation via the bacterial Tat
pathway is equally high, then it is easy to imagine how a high level
of expression of precursor protein will lead to saturation of export .
Factors additional to Tat(A/E)BC might be able to enhance the
efficiency of coupling between the flux of protons across the
membrane and protein translocation .
We have carried out a genetic analysis for multicopy genes that
relieve the saturation of export of ssTorA-GFP-SsrA, in turn
resulting in higher cell fluorescence that enabled the selection of
the respective clones by flow cytometry . In addition to pspA,
which is the subject of the present investigation, the genetic screen
also led to isolation of the gene encoding the Tat translocon
component TatC and several additional genes whose precise role in Tat
export is the subject of ongoing studies . The diverse functions
exhibited by these genes suggest that several distinct processes
might be contributing to the saturation of protein export .
We found that expression of PspA relieves the export saturation
that occurs upon high-level expression of heterologous (ssTorA-GFP-SsrA)
and native (SufI, CueO) Tat substrates . Saturation of export is
manifest with the accumulation of the preprotein in the insoluble
portion of the spheroplast fraction . As a result of the action of
PspA, the amount of insoluble precursor is reduced concomitant with
an increase in the protein in the periplasmic fraction . We also found
that, for all of the proteins tested, the export saturation was
exacerbated in strains deficient in pspA . It is important to
note that pspA affects efficiency of protein export only under
conditions in which the transport machinery is saturated . When SufI
is expressed at a low level from the chromosomal copy, no
accumulation of precursor protein is observed in the spheroplast
fraction either in WT cells or in a pspA mutant .
The precise mechanism by which PspA is able to mediate transfer of
the protein from the insoluble spheroplast fraction to the periplasm
is not clear . PspA may be affecting any of a number of processes,
including, for example, the folding of the protein into a form
competent for export, improved coupling of the proton flux with
secretion, proteolysis of membrane-associated translocation-incompetent
precursors, or even release of the newly translocated protein
from the periplasmic side of the membrane .
Whatever the precise mechanism of the action of PspA might be, it
is clearly not related to the regulatory role of the protein as an
inhibitor of the enhancement of transcription by PspF (25) .
Deletion of the other genes in the psp operon, including the
transcriptional activator pspF or the two positive regulators
pspBC, did not exacerbate the saturation of ssTorA-GFP-SsrA
export . Thus, although PspA has been shown to bind PspB, PspC, and
PspF in vivo (1, 19), these interactions
are not involved in the observed PspA-dependent increase in Tat
export efficiency .
The level of PspA was markedly increased when Tat export was
nearly or completely abolished as a result of the inactivation of Tat
genes (i.e., in
tatA,
tatB,
tatC,
or
tatABCDE
mutant strains) . Consistent with these findings, Kleerebezum et al .
found that depletion of proteins involved in Sec translocation
occurring after the protein reaches the membrane (i.e., in SecD,
SecF, and SecA) led to induction of PspA . These authors postulated
that the PspA-inducing signal was dissipation of the
µH+,
such as occurs upon entrance of a precursor protein into and
subsequent blockage of the export apparatus in the inner membrane .
Similarly, Van der Laan et al . demonstrated that depletion of YidC
also resulted in elevated levels of PspA (42) . Induction
of PspA expression upon depletion of YidC proved to be a reliable
indicator of a reduced proton motive force, which is in line
with previous suggestions that PspA senses membrane damage and/or a
reduction of the proton motive force . Since the translocation defects
observed in a psp mutant strain are caused by a drop in proton
motive force ( µH+)
and at least one function of PspA appears to be maintenance of
µH+
under these stress conditions (21), it is tempting
to speculate that stimulation of Tat transport by PspA might be
through maintenance of
µH+
during translocation of Tat precursors .
In conclusion, we note that the identification of factors that can
increase protein flux and enhance the yield of secreted proteins via
the Tat pathway is significant from a biotechnology standpoint . The
Sec pathway has served as the primary conduit for the secretion of
many industrially important proteins . However, the observation that
many Sec substrates can become stuck in the translocation pore is
problematic when seeking high recombinant yields . To date, there have
been no reported cases of precursors becoming jammed in the Tat
machinery . In fact, efforts to develop genetic constructs that form
membrane-spanning translocation intermediates have proved largely
unsuccessful (27) . The primary limitation of the
Tat pathway relative to the Sec pathway is the relatively poor export
efficiency of proteins targeted to the Tat pathway . Therefore,
strategies whereby cellular factors such as those identified herein
are coexpressed with recombinant proteins of interest should help
alleviate the inefficiency of Tat transport .
We are especially grateful to P . Model for the generous gift of
psp mutants and to J . Tommassen for anti-PspA antisera . We thank
G . Buchanan for assistance with pulse-chase assays .
This work was supported by a grant from the Foundation for Research
to G.G . P.L . is supported by a BBSRC-funded Ph.D . studentship,
and T.P . is a Royal Society Research Fellow .
* Corresponding author . Mailing address: Department of Chemical
Engineering, University of Texas, Austin, TX 78712 . Phone: (512) 471-6975 . Fax:
(512) 471-7963 . E-mail: gg@che.utexas.edu.
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