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Journal of Bacteriology, February 2004, p . 706-712, Vol . 186,
No . 3
The
NeuC Protein of Escherichia coli K1 Is a UDP N-Acetylglucosamine
2-Epimerase
Willie F . Vann,1* Dayle A . Daines,2,
Andrew S . Murkin,3 Martin E . Tanner,3 Donald O . Chaffin,4
Craig E . Rubens,4 Justine Vionnet,1 and Richard P . Silver2
Department of Microbiology and Immunology, University of Rochester Medical
Center, Rochester, New York 14642,2 Laboratory of Bacterial Toxins,
Center for Biologics Evaluation and Research, Food and Drug Administration,
Bethesda, Maryland 20892,1 Department of Chemistry, The University of
British Columbia, Vancouver, British Columbia, Canada V6T 1Z1,3
Department of Pediatrics, University of Washington, Children's Hospital and
Regional Medical Center, Seattle, Washington 981054
Received 18 July 2003/ Accepted 27 October 2003
The K1 capsule is an essential virulence determinant of Escherichia
coli strains that cause meningitis in neonates . Biosynthesis
and transport of the capsule, an
-2,8-linked
polymer of sialic acid, are encoded by the 17-kb kps gene
cluster . We deleted neuC, a K1 gene implicated in sialic acid
synthesis, from the chromosome of EV36, a K-12-K1 hybrid, by allelic
exchange . Exogenously added sialic acid restored capsule expression
to the deletion strain ( neuC),
confirming that NeuC is necessary for sialic acid synthesis . The
deduced amino acid sequence of NeuC showed similarities to those of
UDP-N-acetylglucosamine (GlcNAc) 2-epimerases from both
prokaryotes and eukaryotes . The NeuC homologue from serotype III
Streptococcus agalactiae complements
neuC .
We cloned the neuC gene into an intein expression vector to
facilitate purification . We demonstrated by paper chromatography that
the purified neuC gene product catalyzed the formation of [2-14C]acetamidoglucal
and [N-14C]acetylmannosamine (ManNAc) from UDP-[14C]GlcNAc .
The formation of reaction intermediate 2-acetamidoglucal with
the concomitant release of UDP was confirmed by proton and phosphorus
nuclear magnetic resonance spectroscopy . NeuC could not use GlcNAc as
a substrate . These data suggest that neuC encodes an epimerase
that catalyzes the formation of ManNAc from UDP-GlcNAc via a
2-acetamidoglucal intermediate . The unexpected release of the glucal
intermediate and the extremely low rate of ManNAc formation likely
were a result of the in vitro assay conditions, in which a key
regulatory molecule or protein was absent .
Although most strains of Escherichia coli are harmless commensals,
certain isolates can be considered primary pathogens because
they possess a variety of virulence determinants that allow the
organism to evade host defenses and cause disease . Clinical syndromes
vary and include several distinct forms of diarrheal disease, urinary
tract infections (32) and, especially in neonates,
sepsis and meningitis (28) . Despite antimicrobial therapy,
meningitis caused by E . coli K1 remains a significant cause of
morbidity and mortality in neonates, and neurologic sequelae are
common among survivors (34) . Most strains of E .
coli responsible for these infections synthesize the K1 capsule
as an essential virulence factor (24,
26) . The K1 capsule is a linear homopolymer of
-2,8-linked
N-acetylneuraminic acid (sialic acid; NeuNAc) (24,
28) . The capsule provides the organism with an
antiphagocytic barrier characterized by the ability of terminal
sialic acid residues to inhibit activation of the alternative
complement pathway (8, 21) . The
K1 capsule is also a poor immunogen, a property attributed to
molecular mimicry of the polysialic acid capsule to
polysialosylglycopeptides on human fetal neuronal tissue (33) .
Biosynthesis and transport of the E . coli K1 capsule are encoded
by the 17-kb kps gene cluster that is located at 67 min on the
E . coli chromosome (4, 37,
40) . The kps cluster is functionally
divided into three regions, with central region 2 being unique among
capsular types . In E . coli K1, region 2 contains the neu
genes, which direct the biosynthesis, activation, and polymerization
of NeuNAc (4, 37, 40) .
Regions 1 and 3 encode proteins that function in the assembly of the
capsule and its transport to the bacterial cell surface .
Biosynthesis of the polysialic acid capsule of E . coli K1 requires
the intracellular condensation of N-acetylmannosamine (ManNAc)
and phosphoenolpyruvate (PEP) to form NeuNAc . This reaction is
catalyzed by NeuB (36) . Activation of NeuNAc is performed
by NeuA, which adds a nucleotide monophosphate to the sugar to
form CMP-NeuNAc (35, 42) . NeuS is the
polysialyltransferase that polymerizes activated CMP-NeuNAc to
polysialic acid (31) . NeuC (41)
and NeuD (9) mutants are complemented by sialic acid
and therefore appear to be involved in sialic acid biosynthesis .
Reactions 1 and 2 summarize the postulated mechanism of sialic
acid synthesis in E . coli K1:
 |
(1) |
 |
(2) |
In mammals, the biosynthesis of sialic acid follows a pathway
different from that observed in prokaryotes . These differences
potentially can be exploited as targets for chemotherapeutic
intervention . Reactions 3 to 6 summarize the postulated mechanism of
sialic acid synthesis in eukaryotes:
 |
(3) |
 |
(4) |
 |
(5) |
 |
(6) |
The formation of ManNAc from UDP-N-acetylglucosamine (GlcNAc)
is the first committed step in sialic acid synthesis . A bifunctional
enzyme catalyzing the epimerization of UDP-GlcNAc to ManNAc and
its subsequent phosphorylation has been purified to homogeneity from
rat liver (14) . The enzyme associates with itself both
as a homodimer and as a hexamer . The dimer catalyzes only the
ManNAc kinase reaction (reaction 2 above), while the hexamer displays
both UDP-GlcNAc 2-epimerase and ManNAc kinase activities (reactions 1
and 2) (12) . In this report, we show that the product
of the neuC gene from region 2 of the kps cluster is the
UDP-GlcNAc 2-epimerase that converts UDP-GlcNAc to ManNAc in E .
coli K1 . This finding is consistent with the observation that the
amino acid sequence of NeuC bears homology to that of the UDP-GlcNAc
2-epimerase portion of the bifunctional eukaryotic enzyme described
above .
Bacterial strains, plasmids, bacteriophages, and media.
Descriptions of the bacterial strains and plasmids used in this study
are listed in Table 1 . The capsule-specific bacteriophage
K1F was described previously (39) . Bacteriophage P1
vir was used to transduce the nanA4 allele (38) .
In general, bacterial cultures were grown at 37°C in Luria-Bertani
(LB) broth or on LB agar supplemented with appropriate antibiotics .
Sucrose media for suicide vector selection were as previously
described (11) . Horse 46 antiserum agar plates
were used to assay K1 capsule precipitin halo formation as described
previously (29, 39) .
| TABLE 1 . Bacterial strains and plasmids used in this study
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Allelic exchange methodology. The neuC deletion strain,
RS2918, was constructed essentially as described previously (11) .
Colony PCR with primers that flanked neuC confirmed the
deletion, which reduced the gene from 1,195 to 110 bp .
Bacteriophage lysis assays. Fifty-milliliter cultures of
EV36, the K-12-K1 hybrid strain, the
neuC
strain RS2918, and RS2918 carrying wild-type neuC in trans
were grown to stationary phase, diluted 1:50 in LB broth, and grown
to mid-log phase at 37°C with appropriate antibiotics . Bacteriophage
K1F was added at a multiplicity of infection of 0.5 . The cultures
were monitored at 600 nm for clearing, indicative of capsule
synthesis resulting in cell lysis due to bacteriophage infection and
propagation .
For K1F bacteriophage plaque assays, 100-µl stationary-phase
cultures of the host strain were mixed with 100 µl of an appropriate
dilution of bacteriophage K1F in 3 ml of LB soft agar (LB medium with
7 g of Bacto Agar per liter) kept at 50°C . The mixtures were
immediately poured onto the surface of LB agar plates and incubated
at 37°C for 4 to 6 h .
Complementation assays. Transformants that were making a
polysialic acid capsule were detected on a minimal agar plate
supplemented with the appropriate antibiotics by streaking
K1-specific bacteriophage across the diameter of the plate . After the
streak had dried, transformants were cross-streaked at a 90° angle to
the bacteriophage and incubated at 37°C for 4 to 6 h . If a
transformant expressed a capsule, growth stopped at the margin of the
bacteriophage streak . Phage-sensitive transformants also were tested
for halo formation on horse 46 antiserum agar plates .
DNA manipulation and sequencing. Restriction endonucleases,
DNA polymerases, and DNA ligases were purchased from Gibco-BRL
(Gaithersburg, Md.) and used according to the manufacturer's
instructions . Enzymatic manipulations of DNA and the preparation of
competent cells for transformation were done as previously described
(3) . DNA for sequence analysis was prepared by PCR
followed by column purification with a Wizard PCR Prep DNA
purification system (Promega, Madison, Wis.) or by plasmid
purification with a Wizard Plus SV Miniprep DNA purification
system (Promega) followed by isopropanol precipitation . DNA
sequencing was performed at the University of Rochester Core Nucleic
Acid Laboratory .
DNA and protein computer analyses. DNA and protein sequence
analyses were done with software from The Genetics Computer Group,
Inc., Madison, Wis (10) . Searches of DNA and
protein databases were done at the National Center for Biotechnology
Information site at www.ncbi.nlm.nih.gov .
Computer analysis of protein sequences also was performed with
the ExPASy Molecular Biology Server at
www.expasy.ch, operated by the Swiss Institute of Bioinformatics
(Geneva, Switzerland) .
Protein purification and quantitation. A stationary-phase
culture of either RS2929 or DH5 (pSR647)
was used to inoculate 1.5 liters of LB broth containing 100 µg
of ampicillin/ml . Cells were shaken at 37°C until the culture
reached an A600 of 0.6 and then were induced with 0.5 mM
isopropyl-ß-D-thiogalactopyranoside (IPTG) .
The temperature was immediately decreased to 22°C, and the cells were
shaken for an additional 21 h . Cells were harvested by centrifugation
and resuspended in 20 ml of 20 mM HEPES-500 mM NaCl (pH 7.8)
containing 1 µg of pepstatin/ml and 1 µg of aprotonin/ml . The cell
suspension was lysed in a French pressure cell (20,000 lb/in2)
and then centrifuged at 10,000 x
g for 15 min at 4°C to remove unbroken cells . The supernatant
(20 ml) was loaded onto a 12-ml chitin column (New England Biolabs)
equilibrated with cold 20 mM HEPES-500 mM NaCl (pH 7.8) . The resin
was washed with 120 ml of 20 mM HEPES-500 mM NaCl (pH 7.8) followed
by 25 ml of 50 mM dithiothreitol (DTT)-20 mM HEPES-500 mM NaCl (pH
7.8) . The column was sealed and incubated for 18 h at 4°C to allow
cleavage by the DTT . The protein was eluted with 10 ml of 50 mM
DTT-20 mM HEPES-500 mM NaCl (pH 7.8) followed by 50 ml of 20 mM
HEPES-500 mM NaCl (pH 7.8) . The protein was stored as a 90% ammonium
sulfate suspension . As needed, aliquots of this enzyme suspension
were centrifuged, and the precipitate was dissolved and dialyzed
against 50 mM morpholinepropanesulfonic acid (MOPS)-100 mM NaCl (pH
7.5) .
Proteins were quantitated by the method of Bradford (5)
with a Bio-Rad (Hercules, Calif.) reagent kit according to the
manufacturer's instructions .
Enzyme assays by NMR. For nuclear magnetic resonance (NMR)
experiments, the protein was isolated from the chitin resin as
described above with 12 ml of HEPES buffer and exchanged into
deuterated sodium phosphate buffer (10 mM, pH 7.5) by four rounds of
concentration and dilution with 4-ml centrifugal filters (10-kDa
MWCO; Millipore) .
The enzyme was diluted to 665 µl and transferred to an NMR tube
containing Chelex-100 resin (20 mg, 200/400 mesh, Na+ form,
previously rinsed with D2O) . The reaction was initiated by
the addition of 35 µl of 100 mM UDP-GlcNAc in D2O, and the
resulting solution (5 mM UDP-GlcNAc) was incubated at 37°C for 2
days . 1H and proton-decoupled 31P NMR spectra
were obtained at timed intervals by using a Bruker 300-MHz spectrometer .
The final solution was stirred with 1 ml of Dowex AG1-X8 resin
(formate form, 100/200 mesh; Bio-Rad) for 1 h, filtered through glass
wool, and lyophilized to dryness . The sample was dissolved in 700 µl
of D2O, and a 1H NMR spectrum was obtained; it
was indistinguishable from that of a standard of 2-acetamidoglucal
previously synthesized by known methods (18,
23) . The sample was lyophilized to dryness again and analyzed by
mass spectrometry: 226 (M + Na+) .
From a separate preparation of NeuC, two 665-µl samples (0.3
mg/ml) were prepared in deuterated buffer in NMR tubes as described
above . To one tube, 0.5 mg of CMP-NeuNAc (1 mM) was added, and then
to both tubes, 35 µl of 100 mM UDP-GlcNAc was added . The reaction
mixtures were incubated at 37°C with monitoring by 1H NMR .
SDS-PAGE. Discontinuous sodium dodecyl sulfate
(SDS)-polyacrylamide gel electrophoresis (PAGE) of proteins was done
according to the method of Laemmli (17) .
Sugar epimerase assays. The reaction mixture for sugar
epimerase assays consisted of 7 to 9 mg of dialyzed NeuC protein/ml,
45 mM MOPS, 45 mM MgCl2 (pH 7.5), and 10 µM UDP-[14C]GlcNAc
(266 mCi/mmol) in a 45- to 160-µl volume . The reaction mixture was
incubated at 37°C for 3 h and then spotted (two 20-µl samples)
on borate-impregnated Whatman no . 3 paper (soaked in 1% sodium
tetraborate and dried prior to chromatography) . The chromatogram was
developed for 16 h by descending chromatography with ethyl
acetate-2-propanol-pyridine-water (50:22:14:14) solvent (43) .
The radioactive portions of the paper were visualized with a
PhosporImager (ImageQuant) . The unlabeled sugar standards were
detected by a silver nitrate dipping procedure . The sugar standards
were solutions (1 mg/ml) of ManNAc, GlcNAc (Sigma Chemical Co.), and
2-acetamidoglucal .
To test for the formation of ManNAc, the 3-h reaction mixture
described above was treated as follows . After the 3-h incubation, the
reaction mixture was adjusted to 0.7, 18, or 35 mM pyruvate in 16 mM
potassium phosphate (pH 7.2) followed by the addition of 2 U of N-acetylneuraminic
acid aldolase (Sigma A-6680) . The reaction mixture was incubated at
37°C for an additional 3 h prior to spotting for paper chromatography
and development in ethyl acetate-2-propanol-pyridine-water
(50:22:14:14) to resolve ManNAc and ethanol-1 M ammonium acetate (pH
7.5) (7.5:3, vol/vol) to resolve NeuNAc .
NeuC is homologous to sugar 2-epimerases. The nonredundant
GenBank translation database was searched with the peptide sequence
of NeuC as the query to determine the probable function of this
protein . Several known and some putative UDP-GlcNAc 2-epimerases from
both prokaryotes and eukaryotes were identified as having significant
homology to NeuC (Table 2) based on an analysis
with BLAST software (1) . Interestingly, the sequence
with the highest homology belonged to the capsule gene cluster
from Streptococcus agalactiae group B (group B streptococci
[GBS]) . This gram-positive bacterium synthesizes an unrelated capsule
with a branched-chain repeat unit having a side chain of galactose
that terminates with a sialic acid residue . The GBS NeuC homologue,
NeuIIIC, displays 57% similarity and 45% identity to NeuC .
Although NeuIIIC is essential for sialylation of the GBS
capsule, the exact function of this protein has not been described .
| TABLE 2 . Homologues of NeuCa
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The bifunctional UDP-GlcNAc 2-epimerase-ManNAc kinase enzyme found in
human, mouse, and rat liver displays homology to NeuC with 53%
similarity and 27% identity over the first 400 amino acids . Epimerase
activity is localized to the N-terminal portion of the bifunctional
liver enzyme (12, 14) .
A Campylobacter coli VC167 gene product, NeuVC167C, also
shows significant similarity to NeuC (Table 2) . NeuVC167C
is involved in modification of C . coli VC167 flagellin with
the sialic acid analogue pseudaminic acid (19) .
SiaA is a GlcNAc-6-P 2-epimerase necessary for sialic acid synthesis
in Neisseria meningitidis group B (22) .
This gram-negative organism synthesizes a polysialic acid capsule
that is identical to that of E . coli K1 (15) . SiaA
displays 52% similarity and 32% identity to NeuC . RfbC, which
encodes a UDP-GlcNAc 2-epimerase that converts UDP-GlcNAc to
UDP-ManNAc (16), is 42% similar and 23% identical to NeuC .
Salmonella rffE (wecB) has been demonstrated to encode
a UDP-GlcNAc 2-epimerase . This protein shows 32% similarity and 21%
identity to NeuC .
Of the homologues described above, the eukaryotic bifunctional
enzyme has been most extensively studied . It has been demonstrated
clearly that this epimerase catalyzes the formation of ManNAc
directly from UDP-GlcNAc via a 2-acetamidoglucal intermediate with
the release of UDP . The sequence homology suggests that the E .
coli K1 neuC gene encodes a UDP-GlcNAc epimerase .
The NeuC homologue from GBS complements a strain with a nonpolar
chromosomal deletion in neuC. RS2918 is a derivative of the
K-12-K1 hybrid EV36 with a deletion in the neuC gene
constructed by allelic exchange methodology . The resulting phenotype
is acapsular, as shown by resistance to capsule-specific
bacteriophage K1F and the lack of precipitin haloes on antiserum
agar . Supplying neuC in trans on plasmid pSR647
restored capsule synthesis to RS2918 (data not shown) . Moreover, the
addition of exogenous NeuNAc to the medium restored capsule synthesis
to RS2921, a nanA (NeuNAc aldolase) derivative of RS2918 (data
not shown) . The mutation in nanA ensures that the NeuNAc added
to the media was targeted for polymer synthesis and not a catabolic
pathway . These observations are consistent with those of previous
studies (29, 41) and support the notion
that NeuC is an essential enzyme in the biosynthesis of sialic
acid . Zeitler et al . previously showed that capsular polysaccharide
production by a neuC insertion mutant was not complemented by
ManNAc (43) .
The gene product with the highest identity to NeuC was NeuIIIC
from GBS . Plasmid pDC128, which contains the NeuIIIC gene, was
used to transform RS2918 . The resulting strain regained the
ability to synthesize a capsule . We also tested the ability of pSR653
to complement the neuC defect in pRS2918 . pSR653 carries the
rfbC gene from Salmonella enterica serovar Borreze . RfbC,
a UDP-GlcNAc 2-epimerase that converts UDP-GlcNAc to UDP-ManNAc
(16), is 23% identical and 42% similar to NeuC . RfbC did not
complement the NeuC defect in RS2918 .
UDP-GlcNAc 2-epimerase assays of NeuC. NeuC was
overexpressed by plasmid pSR647 as an intein-chitin binding protein
fusion and purified by affinity chromatography on chitin resin . The
purified enzyme migrated as a single major protein band on SDS-PAGE
with an expected molecular weight of 45,000 (Fig . 1) .
|
FIG . 1 . Polyacrylamide gel-purified:NeuC . The mobilities of molecular
weight (M.W.) standards (Std.) are shown at the right.
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UDP-GlcNAc 2-epimerase assays were performed with purified NeuC .
Figure 2, lane 1, shows the radioactive reaction products
resulting from the incubation of 10 µg of the purified NeuC fraction
with UDP-[14C]GlcNAc . The major product of the reaction
migrated as a rapidly moving spot that comigrated with
2-acetamidoglucal, a putative intermediate in the epimerization of
UDP-GlcNAc to ManNAc or UDP-ManNAc . In addition, a fainter, more
slowly moving product that comigrated with the ManNAc standard was
observed . The third, even fainter slowly moving spot near the origin
has not been identified . When the enzyme fraction was heated to
95°C for 5 min prior to incubation (Fig . 2, lane 2), no
products were observed . The identity of the slowly moving spot
that comigrated with the ManNAc standard was confirmed by the
following experiment . Purified NeuC was incubated with UDP-[14C]GlcNAc
as described above for 3 h and then treated with NeuNAc aldolase
and pyruvate . This procedure resulted in the appearance of a
spot that comigrated with sialic acid and a decrease in the intensity
of the putative ManNAc spot, as expected (data not shown) . These
results are consistent with the hypothesis that NeuC is a UDP-GlcNAc
2-epimerase .
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FIG . 2 . UDP-GlcNAc 2-epimerase activity of NeuC . (A) Autoradiogram .
Purified enzyme was incubated with UDP-[14C]GlcNAc for 3 h at
37°C (lane 1) . As a control, enzyme was boiled for 5 min prior to the
addition of substrate (lane 2) . A total of 40 µl of each reaction
mixture was spotted at the origin of borate-impregnated paper, and the
chromatogram was developed in ethyl acetate-2-propanol-pyridine-H2O
(50:22:14:14) . (B) Sugar standard . One milligram of each sugar per
milliliter was spotted (25 µl), and the chromatogram was developed with
silver nitrate.
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To determine whether NeuC could use GlcNAc as a substrate, 10 µg of
the purified NeuC fraction was incubated with 9 nmol of [14C]GlcNAc .
An identical incubation was performed with 10 µg of bovine serum
albumin as a negative control . No epimerization from GlcNAc to ManNAc
was detected (data not shown) . This finding indicated that GlcNAc is
not a substrate for NeuC . To determine whether GlcNAc-6-P is a
substrate for NeuC, a 5 mM sample was incubated with the enzyme and
monitored by 1H NMR spectroscopy (see assay below) . The
absence of any reaction under these conditions indicated that
GlcNAc-6-P is not a substrate for NeuC .
The enzymatic reaction was examined by 1H and 31P NMR
spectroscopy to provide further identification of the reaction
products . A sample of NeuC was purified by affinity chromatography on
chitin resin, followed by exchange into phosphate buffer prepared
in D2O . UDP-GlcNAc was added, and 1H and 31P
NMR spectra (Fig . 3A and 4A,
respectively) were obtained immediately . After incubation at 37°C for
43.5 h, a new singlet at 6.59 ppm in the 1H NMR spectrum
was observed (Fig . 3B) . This finding is consistent
with the formation of 2-acetamidoglucal (Fig . 3C), whereby the
anomeric proton of UDP-GlcNAc at 5.40 ppm has been converted to
a vinylic proton . Integration of the H-1 signals indicates that 8%
conversion occurred over the course of 15 h and that 19% conversion
was achieved by 43.5 h . Repeated measurements confirmed that the rate
of conversion was dependent on the enzyme concentration, and control
experiments lacking enzyme showed no detectable formation of
2-acetamidoglucal under otherwise identical conditions . No signals
attributable to ManNAc (5.02 ppm for H-1 of the
-anomer
and 4.92 ppm for H-1 of the ß-anomer [7]) were
observed in the spectrum, presumably due to the inherent
insensitivity of the technique (<1% product would not be detected by
this method) . Additionally, the spectrum revealed a new doublet at
7.87 ppm, adjacent to the doublet from H-5 of the uracil ring in the
substrate, indicative of the formation of UDP . The 31P NMR
spectrum (Fig . 4B) further supports these data, as
a pair of doublets appeared at -6.26 and -9.75 ppm, downfield from
those of UDP-GlcNAc . A spectrum for UDP was obtained for comparison
(Fig . 4C) .
|
FIG . 3 . (A and B) 1H NMR spectra of the incubation of
UDP-GlcNAc with NeuC after 3 min (A) and 43.5 h (B) . t, time . (C) 1H
NMR spectrum of an authentic sample of 2-acetamidoglucal . The position
of the anomeric proton is indicated by the arrow.
|
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FIG . 4 . (A and B) 31P NMR spectra of the incubation of
UDP-GlcNAc with NeuC after 6 min (A) and 43.5 h (B) . t, time . (C)
31P NMR spectrum of an authentic sample of UDP.
|
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To further confirm that 2-acetamidoglucal had been formed, the enzyme
solution was treated with an anion-exchange resin to remove all
phosphate-containing species . The 1H NMR and mass spectra
of the resulting material were in agreement with those of authentic
2-acetamidoglucal (18, 23) .
It has been shown that CMP-NeuNAc is a feedback inhibitor of the
mammalian UDP-GlcNAc 2-epimerase (14) . Therefore, CMP-NeuNAc
was tested as a possible regulator of NeuC . A sample of NeuC in
deuterated buffer was incubated with 5 mM UDP-GlcNAc in the presence
of 1 mM CMP-NeuNAc, and the reaction was monitored by NMR . However,
no difference in the products or extent of the reaction was detected
relative to those of a control lacking CMP-NeuNAc (data not shown) .
In a similar experiment, the enzyme was assayed in the presence of
either 5 mM NAD+ or 5 mM NADP+, and no
detectable changes in activity were observed .
In this report, we present evidence that NeuC catalyzes the
epimerization of UDP-GlcNAc to ManNAc, the first committed step in
sialic acid biosynthesis in E . coli K1 . These data are in good
agreement with both the protein homologies and the indirect results
reported by other investigators (29, 41) .
Two radiolabeled reaction products that comigrated in paper
chromatography with ManNAc and 2-acetamidoglucal resulted from the in
vitro incubation of purified NeuC protein with UDP-[14C]GlcNAc .
However, no products were observed when the enzyme fraction was
boiled or when an excess of unlabeled UDP-GlcNAc was added (Fig.
2) . This result indicated that neither product was
the result of nonenzymatic hydrolysis or epimerization of the
substrate . In their studies of UDP-GlcNAc 2-epimerase purified from
rat liver, Sommar and Ellis (30) proposed a
reaction mechanism that could explain these data (Fig .
5) . They posited that the enzymatic mechanism was an ordered one
in which the first product released was UDP, followed by the
irreversible formation of ManNAc . This mechanism included a
2-acetamidoglucal intermediate, which was enzyme bound . This
mechanism does not require a cofactor and is consistent with the
requirement for a nucleotide sugar in the formation of ManNAc . It is
also consistent with the observation that purified NeuC did not
catalyze the epimerization of GlcNAc to ManNAc .
|
FIG . 5 . Proposed mechanism of the reaction catalyzed by the mammalian
UDP-GlcNAc 2-epimerase.
|
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The proposed role for NeuC as a UDP-GlcNAc 2-epimerase is supported
by the observed sequence homology between this enzyme and the
well-characterized mammalian and E . coli (rffE) UDP-GlcNAc
2-epimerases (27 and 21% identities, respectively) . This enzyme
clearly is required for sialic acid biosynthesis . It is therefore
expected that this enzyme converts UDP-GlcNAc to ManNAc and UDP . Both
the chromatographic and the NMR spectroscopic assays indicate,
however, that the primary reaction observed is the conversion of
UDP-GlcNAc to 2-acetamidoglucal and UDP . The chromatographic assay
indicated that a very low level of ManNAc is also formed, but this
was an extremely slow process . Thus, two scenarios emerge: either a
second enzyme, such as a glycosidase (glycosidases are known to
hydrate glycals [18]), is required to complete the
conversion to ManNAc, or the purified enzyme is missing an important
regulator or coenzyme that is required to complete the catalytic
cycle . The second scenario is consistent with the observation that
even the formation of 2-acetamidoglucal seems to be quite slow . One
attempt was made to determine whether CMP-N-acetylneuraminic
acid is an allosteric activator required for full activity; however,
no effect was observed .
The formation of 2-acetamidoglucal nevertheless strengthens the
link between NeuC and other UDP-GlcNAc 2-epimerases (27) .
The E . coli UDP-GlcNAc 2-epimerase, RffE, is a true epimerase
that interconverts UDP-GlcNAc and UDP-ManNAc . Several lines of
evidence support a mechanism involving the anti-elimination of
UDP to form 2-acetamidoglucal, followed by the syn-addition of
UDP to form a product (20) . In fact, the enzyme is known
to release 2-acetamidoglucal and UDP into solution once every
1,000 turnovers .
The mammalian UDP-GlcNAc 2-epimerase converts UDP-GlcNAc to UDP
and free ManNAc (this action essentially is irreversible and
technically is not epimerization) and plays a key role in sialic acid
biosynthesis . This enzyme also is thought to use a mechanism
involving the anti-elimination of UDP to give 2-acetamidoglucal,
followed by the syn-addition of water to give ManNAc (7,
30) (Fig . 5) . It has been shown
that this enzyme will accept the intermediate 2-acetamidoglucal from
solution and hydrate it to form ManNAc . Given that NeuC also
catalyzes the anti-elimination of UDP to form
2-acetamidoglucal, it seems reasonable to assume that it also
functions as a UDP-GlcNAc 2-epimerase in vivo . During the in vitro
studies reported in this article, it is possible that a key protein
or regulatory molecule that is required for NeuC to complete the
reaction was lacking . Therefore, we simply might have been seeing the
products of a "crippled" enzyme that was unable to complete its
normal reaction under the specific conditions of the assay .
While the previous information argues strongly for the assignment
of NeuC as a UDP-GlcNAc 2-epimerase, it is conceivable that NeuC
actually catalyzes a different reaction in vivo . One possibility is
that the true substrate is UDP-ManNAc and that the role of NeuC
simply is to catalyze hydrolysis of the glycosyl-UDP bond . This
possibility seems unlikely, however, since 2-acetamidoglucal and UDP
would be the expected intermediates in this process and the former
should be converted readily to ManNAc . An alternate possibility is
that NeuC is actually a glycosyl transferase that utilizes UDP-GlcNAc
as a substrate . This possibility is not unreasonable, since the
UDP-GlcNAc 2-epimerases share structural similarities with a family
of glycosyltransferases (26) . In the absence of an
acceptor molecule, the glycal could be formed as an unnatural
product . This possibility also seems unlikely, since one would not
expect to observe the formation of any ManNAc in this process, and it
does not help to explain the role of NeuC in sialic acid
biosynthesis .
Surface-displayed sialic acid is an important virulence determinant
in a number of bacterial pathogens besides E . coli K1 . These
include the N . meningitidis polysialic acid capsule, terminal
sialic acid residues on the S . agalactiae capsule, and the
sialylated flagella of C . coli . The synthesis of sialic acid
differs in prokaryotes and eukaryotes .
GBS synthesize a branched-chain polysaccharide capsule, and the
only similarity with the E . coli K1 capsule is a single
terminal sialic acid residue . The NeuIIIC gene of GBS, however,
complements
neuC .
It has also been shown that the NeuIIIA gene (previously
designated cpsF) of GBS can complement a mutation in the E .
coli K1 neuA gene, which encodes the CMP-N-acetylneuraminic
acid synthetase (13) . Indeed, a plasmid containing the
four GBS genes involved in sialic acid synthesis, pDC128,
successfully complemented strains with mutations in neuD,
neuB, neuC, or neuA, the E . coli K1 region 2
sialic acid synthesis genes (D . Daines, unpublished data) . This
result indicates that the sialic acid biosynthetic pathways for
incorporation into capsular polysaccharides are probably identical in
these two pathogens .
The epimerases encoded by rffE and rfbC catalyze the conversion
of UDP-GlcNAc to UDP-ManNAc . That rfbC does not complement the
neuC deletion is not surprising, since NeuC cleaves UDP-GlcNAc
during catalysis . During the preparation of this article, Ringenberg
et al . reported (25) that rffE is not necessary
for polysialic acid synthesis in E . coli K1 . These authors
also reported that ManNAc-6-phosphate is not involved as an
intermediate in the formation of sialic acid . The observations of
these authors support our suggestion that NeuC converts UDP-GlcNAc to
ManNAc and fit well with the observed homology to the epimerase
domain of the mammalian UDP-GlcNAc 2-epimerase .
We thank Virginia Clark for providing the N . meningitidis group
B strain, Chris Whitfield for providing the rfbC gene .
This work was supported by NIH grants AI39615 to R.P.S . and
AI25152 and AI22498 to C.E.R . D.A.D . was supported by Molecular
Pathogenesis of Bacteria and Viruses training grant AI07362 from the
Public Health Service . This work was also supported by NSERC grant
AI07362 to A.S.M . and M.E.T .
* Corresponding author . Mailing address: Laboratory of
Bacterial Toxins, Center for Biologics Evaluation and Research, Food and Drug
Administration, Bethesda, MD 20892 . Phone: (301) 496-2008 . Fax: (301) 402-2776 .
E-mail: wvann@helix.nih.gov.
Present address: Seattle Biomedical Research Institute, Seattle, WA
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