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Journal of Bacteriology, February 2004, p . 646-653, Vol . 186,
No . 3
Nine
Mutants of Chlorobium tepidum Each Unable To Synthesize a Different
Chlorosome Protein Still Assemble Functional Chlorosomes
Niels-Ulrik Frigaard,* Hui Li, Kirstin
J . Milks, and Donald A . Bryant
Department of Biochemistry and Molecular Biology, The Pennsylvania State
University, University Park, Pennsylvania 16802
Received 19 August 2003/ Accepted 27 October 2003
Chlorosomes of the green sulfur bacterium Chlorobium tepidum
comprise mostly bacteriochlorophyll c (BChl c), small amounts
of BChl a, carotenoids, and quinones surrounded by a lipid-protein
envelope . These structures contain 10 different protein species
(CsmA, CsmB, CsmC, CsmD, CsmE, CsmF, CsmH, CsmI, CsmJ, and CsmX) but
contain relatively little total protein compared to other
photosynthetic antenna complexes . Except for CsmA, which has been
suggested to bind BChl a, the functions of the chlorosome
proteins are not known . Nine mutants in which a single csm gene
was inactivated were created; these mutants included genes encoding
all chlorosome proteins except CsmA . All mutants had BChl c
contents similar to that of the wild-type strain and had growth
rates indistinguishable from or within
90%
(CsmC- and CsmJ-) of those of the wild-type
strain . Chlorosomes isolated from the mutants lacked only the protein
whose gene had been inactivated and were generally similar to those
from the wild-type strain with respect to size, shape, and BChl c,
BChl a, and carotenoid contents . However, chlorosomes from the
csmC mutant were about 25% shorter than those from the
wild-type strain, and the BChl c absorbance maximum was
blue-shifted about 8 nm, indicating that the structure of the BChl
c aggregates in these chlorosomes is altered . The results of the
present study establish that, except with CsmA, when the known
chlorosome proteins are eliminated individually, none of them are
essential for the biogenesis, light harvesting, or structural
organization of BChl c and BChl a within the
chlorosome . These results demonstrate that chlorosomes are remarkably
robust structures that can tolerate considerable changes in protein
composition .
Photosynthetic organisms have evolved a large variety of specialized
light-harvesting structures that allow them to capture light energy .
These antennae typically contain chlorophylls or linear tetrapyrroles
as the chromophores . The molecular structures of many
light-harvesting pigment-protein complexes are known in atomic
detail, including those of light-harvesting complexes 1 and 2 from
purple bacteria (10), light-harvesting complex II
from chloroplasts (20), the Fenna-Matthews-Olson protein
from green sulfur bacteria (2, 3,
21, 29), and various phycobiliproteins
from cyanobacteria (27) . A common feature of these
structures is that the light-harvesting pigments (chlorophylls,
carotenoids, and phycobilins) are organized and spatially arranged by
the protein, although the pigments often interact both with one
another and with the polypeptide . In addition, the components
of these antenna structures are always present in a defined
stoichiometric relationship .
The largest light-harvesting antenna structures known are the
chlorosomes of green bacteria (2, 3,
17, 19, 24,
30) . Chlorosomes are unique among light-harvesting
antennae because they have the lowest protein-to-pigment ratio and
because their major pigment, typically bacteriochlorophyll c
(BChl c), is arranged in large aggregates whose structures do
not involve protein molecules . Chlorosomes are also the only known
antenna structures that do not have a stoichiometrically fixed ratio
of their major pigment (BChl c) to a protein component (18,
31; this work) . Additionally, chlorosomes do not
have strictly defined dimensions, and isolated chlorosomes exhibit
considerable variation in size and shape . For example, chlorosomes
from Chlorobium tepidum are about 100 to 200 nm long and 40 to
60 nm wide (4) . The BChl c aggregates are
encapsulated by a lipid-protein envelope that harbors all of the
proteins present in the chlorosomes (5, 8,
32) . Chlorosomes also contain carotenoids, isoprenoid
quinones, and small amounts of BChl a (14,
15) . The BChl a in chlorosomes is almost
certainly bound to the most abundant protein, CsmA, possibly in a
one-to-one ratio (4, 23, 26) .
This CsmA-BChl a complex transfers the excitation energy away
from the BChl c aggregates of the chlorosome to the BChl a-binding
Fenna-Matthews-Olson protein and the reaction centers . The
organization of the carotenoids and isoprenoid quinones is not well
understood except that most of them interact with the BChl molecules
and that most of them appear to be present in the interior of the
chlorosome (15) .
In addition to CsmA, chlorosomes from the green sulfur bacterium
C . tepidum contain nine other proteins: CsmB, CsmC, CsmD, CsmE,
CsmF, CsmH, CsmI, CsmJ, and CsmX (5-8,
32) . The genes encoding all 10 proteins have been
cloned, and antibodies to recombinant Csm proteins have been used to
study the organization of these proteins, their subcellular
distribution, and other aspects of chlorosome structure and
biogenesis (4-8, 18,
31, 32) . Those and other
studies have shown that all 10 chlorosome proteins are exposed at the
surface of the chlorosome and that some chlorosome proteins, notably
CsmA, form oligomeric complexes, as revealed by chemical
cross-linking (4) . Apart from information generated
by the studies concerning CsmA, it is not clear which functions the
chlorosome proteins have or whether they are essential to the cells
or to the integrity of the chlorosomes . In the present work, we have
therefore systematically attempted to inactivate each of the 10 genes
that encode chlorosome proteins and subsequently to identify
phenotypic effects in the mutants .
Organisms and growth conditions. The strain of C . tepidum
used and its cultivation and transformation have been described
previously (13, 18) . Growth rates in the
absence of antibiotics were determined from the optical densities
at 600 nm of cultures grown in 25-ml screw-cap tubes at 47°C as
previously described (18) . The growth rates were calculated
as averages of four to six measurements, for which the standard
deviation did not exceed 10% of the average . Various light intensities
were obtained by adjusting the number of light bulbs and by
using white paper or transparent plastic bubble wrap mounted on the
glass door of the incubator for shading and insulation . Cell cultures
for chlorosome preparations were grown in 2-liter flasks positioned
in a water bath at 47°C and at a light intensity of approximately 120
µmol of photons m-2 s-1 .
Escherichia coli strain DH5
(Bethesda Research Laboratories, Gaithersburg, Md.) was used for the
propagation of all plasmids except pCT841 (Table 1),
which was propagated in E . coli strain SCS110 (dam dcm;
Stratagene, La Jolla, Calif.) to allow the digestion of the plasmid
with the methylation-sensitive restriction enzyme BsaBI .
| TABLE 1 . Plasmids used in this study
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Antibiotic resistance markers. Mutations in C . tepidum
were created by using the gentamicin resistance marker aacC1
from plasmid pMS255 (1) or the streptomycin and
spectinomycin resistance marker aadA from plasmid pHP45
(25) or pSRA2 (Table 1) . Plasmid
pSRA2 was derived from pHP45
(25) as follows . A 1,030-bp fragment containing the
resistance-conferring gene aadA was amplified and modified to
include HindIII restriction sites (underlined) by PCR with the
primers aadAF (5'-ACTGGTCCAGAAGCTTGACCGA-3') and aadAB
(5'-AAGCGGCGTAAGCTTGAACGAA-3') with pHP45
as the template . The resulting DNA fragment was digested with HindIII
and cloned into the vector fragment of HindIII-digested pRL409
(12) . A plasmid with the polylinkerconfiguration
EcoRI-SacI-KpnI-BamHI-XbaI-SalI-HincII-PstI-SphI-HindIII-aadA-HindIII-SphI-PstI-HincII-SalI-XbaI-BamHI-KpnI-SacI-EcoRI
was se-lected and named pSRA2 . The EcoRI fragment from pSRA2
containing aadA contains 1,103 bp . Plasmid pSRA2 offers several
advantages over pHP45 .
It is a high-copy-number plasmid, the aadA cassette in pSRA2
has a more versatile polylinker, and the modified aadA gene is
devoid of the transcription terminators, which are present in the
cassette from pHP45
and which interfere with the PCR in vitro and gene transcription in
vivo .
Construction of C . tepidum mutants. Plasmids
containing fragments of C . tepidum genomic DNA were obtained
from an existing genomic library (5) and various protein
expression constructs (32) . The csm genes in
these plasmids were insertionally inactivated by cloning the aadA
cassette from either pSRA2 or pHP45
or by cloning the aacC1 cassette from pMS255 into the coding
sequence . Table 1 and Fig . 1 contain
details about the plasmids used and the production of the gene
inactivation constructs . Natural transformation of C . tepidum
was performed as described previously (13) . Transformants
were analyzed for segregation by PCR (csmB, csmC,
csmD, csmE, csmED, csmF, and csmH
mutants) or Southern blot hybridization analysis (csmI,
csmJ, and csmX mutants) as described previously (13) .
The primers used for PCR analysis (Fig . 1) were derived
from the genome sequence of C . tepidum (11)
by using MacVector software (version 7.0; Genetics Computer Group,
Madison, Wis.) . Genomic DNA isolated from the csmI, csmJ,
and csmX mutants for Southern blot hybridization analyses was
digested with BsaBI, BlpI, and SacII,
respectively . Hybridization probes for Southern analyses were
obtained by excising the genes from their respective expression
constructs (pET3d::csmI, pET3d::csmJ, and pET32a::csmX) .
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FIG . 1 . Restriction maps showing the regions contained in plasmids
(Table 1) and the binding sites of primers used to
verify the csm mutants of C . tepidum . Black triangles
indicate the insertion sites of antibiotic resistance markers . See the
text for details.
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Chlorosome preparation and analysis. Chlorosomes were prepared
and their protein compositions were analyzed as described previously
(32) . Fluorescence emission spectra under
oxidizing conditions were recorded after the incubation of the
chlorosomes (absorption of 0.2 at the Qy peak around 745
nm) in aerobic buffer (10 mM KH2PO4, pH 7.0) for about 30
min and under reducing conditions after incubation with
10
mM sodium dithionite for about 2 h . Pigment analyses by absorption
spectroscopy of methanol extracts and high-pressure liquid chromatography
(HPLC) were performed as described previously (18),
except that the HPLC pump and injector were replaced with an Agilent
Technologies (Waldbronn, Germany) 1100 series binary pump (model
G1312A), a vacuum degasser (model G1379A), and a manual injector
(model G1328A) .
Electron microscopy. Chlorosomes were adsorbed on
Formvar-coated copper grids, negatively stained with 2% (wt/vol)
uranyl acetate, and visualized with a 1200EXII electron microscope
(JEOL, Peabody, Mass.) .
Construction of csm mutants. Except for the
transformants containing csmA::aadA, all csm
transformants of C . tepidum segregated after two or three streakings
on selective medium . Only merodiploid strains, which resisted
segregation under the growth conditions used even after repeated
streaking, were obtained from transformations with the csmA::aadA
construct pCAS22 (Table 1) . This result suggests that
CsmA may play an essential role in light harvesting and that this is
not the case for the other nine proteins of the chlorosome envelope .
A csmE csmD double mutant was obtained by using the construct
pCT65r1 (Table 1) . The csmE csmD double mutant
grew like the wild-type strain, produced chlorosomes, and did not
exhibit any obvious growth or pigmentation phenotype (data not
shown) . Only the nine mutants lacking a single Csm protein were fully
characterized in this work .
Characterization of cell cultures. The following growth
rates were measured for the wild-type strain (the light intensity, in
micromoles of photons per square meter per second, is given in
parentheses after the growth rate): 0.09 h-1 (8), 0.20 h-1
(30), 0.25 h-1 (120), 0.23 h-1 (210), and 0.21
h-1 (580) . The csm mutants generally had growth rates
that were indistinguishable from that of the wild-type strain
at all light intensities tested . Exceptions to this situation were
noted for the csmC and csmJ mutants . At a limiting light
intensity (8 µmol of photons m-2 s-1), the csmC
mutant consistently had a growth rate that was approximately 90% of
that of the wild-type strain . In contrast, at saturating and
inhibitory light intensities ( 120
µmol of photons m-2 s-1), the csmJ
mutant had growth rates that were about 90% of the wild-type value .
Cells used for chlorosome preparations were grown in 2-liter batch
cultures . The cellular BChl c contents of the wild-type strain
and all mutant strains grown under these conditions, as judged from
the ratios of BChl c absorption to the pigment-independent
light scattering of the cells, were very similar for all cultures
(data not shown) . The absorbance properties of wild-type cells and
all csm mutant cells were also generally very similar . The
BChl c absorption maximum in the wild-type and mutant strains
was about 750 nm, except in the csmC mutant, in which it was
blue-shifted to 743 nm . The fluorescence emission spectra of all
cells recorded under reducing conditions were also very similar .
These spectra had emission maxima from BChl c at around 772 to
773 nm (769 nm for the csmC mutant) and emission peaks from
BChl a at around 805 nm .
Characterization of isolated chlorosomes. No obvious
differences from wild-type cells were generally observed during the
isolation of chlorosomes from the mutant cell cultures . The only
exception to this generalization applies to the isolation of
chlorosomes from the csmC mutant . For this mutant, a small
amount of an orange-colored fraction banded at the top of the
suspension after the ultracentrifugation of disrupted cells, whereas
no such colored fraction appeared in material from wild-type cells .
The absorption spectrum of this orange fraction was dominated by
carotenoids in the 400-to-500-nm range, although smaller absorption
maxima occurred at around 750 and 795 nm . This orange fraction also
contained CsmA, as judged from sodium dodecyl sulfate-polyacrylamide
gel electrophoresis (SDS-PAGE) analysis (data not shown) . This
absorption spectrum is very similar to the absorption spectrum of
vestigial chlorosomes, designated carotenosomes, which can be
isolated from a bchK mutant of C . tepidum that cannot
synthesize BChl c (18; N.-U . Frigaard et
al., unpublished data), except for the presence of a minor 750-nm
peak . Thus, the orange fraction from the csmC mutant appears
to represent a fraction of chlorosomes with a highly reduced BChl
c content . This fraction represented only a small ratio of the
total chlorosome fraction (roughly 5% based on carotenoids and BChl
a), which was otherwise similar in quantity and density to the
chlorosomes of the wild-type strain .
Electron microscopy of negatively stained chlorosomes revealed
only minor differences among chlorosomes from the wild-type strain
and the nine csm mutant strains . The measured dimensions of
chlorosomes from the wild-type strain were as follows (sample size,
56): length, 142 ± 36 nm; width, 53 ± 10 nm; and length-to-width
ratio, 2.7 ± 0.6 (Fig . 2A) . Chlorosomes that had
dimensions that deviated significantly were those from the csmC
mutant (length, 95 ± 26 nm; width, 50 ± 12 nm; length-to-width ratio,
2.0 ± 0.5 [sample size, 44] [Fig . 2B]) and those
from the csmH mutant (length, 112 ± 27 nm; width, 52 ± 10 nm;
length-to-width ratio, 2.2 ± 0.4 [sample size, 63] [Fig.
2C]) .
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FIG . 2 . Transmission electron micrographs of chlorosomes isolated from
the C . tepidum wild-type strain (A), the csmC mutant (B),
and the csmH mutant (C) . Chlorosomes were stained with 2%
(wt/vol) uranyl acetate . Bars, 200 nm.
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Figure 3A shows the results of an SDS-PAGE analysis of the
chlorosomes isolated from the wild-type strain and the nine csm
mutants . It is readily apparent from this silver-stained gel that
chlorosomes from the csmC, csmD, csmI, and
csmJ mutants lack the protein encoded by the inactivated gene and
that the chlorosomes of all other mutants, in which these four genes
are not inactivated, have normal amounts of the proteins encoded by
these genes . Immunoblotting analyses (Fig . 3B) with
antibodies raised against recombinant chlorosome proteins confirmed
that the chlorosomes of each of the nine mutant strains lacked only
the protein encoded by the gene inactivated in the particular mutant
strain . Thus, it is clear from the results presented in Fig.
3 that the absence of any given chlorosome protein
has little effect on the levels of the other chlorosome proteins . A
minor exception to this generalization is that the chlorosomes of the
csmC mutant appear to have a lower (Fig . 3A)
but detectable (Fig . 3B) CsmH content .
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FIG . 3 . Analysis of the protein compositions of chlorosomes isolated
from the wild-type strain (WT) and csm mutants of C . tepidum .
(A) SDS-PAGE gel stained with silver . Lane M, molecular mass markers .
(B) Immunoblots probed with antibodies specific for recombinant
chlorosome proteins . (Note that the antiserum to CsmF cross-reacts with
CsmB, whose amino acid sequence is about 40% similar to that of CsmF .
The antiserum to CsmB does not cross-react with CsmF.).
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Table 2 summarizes the spectroscopic and biochemical
properties of chlorosomes isolated from the wild-type and csm
mutant strains . Wild-type chlorosomes contained about 0.27 g of
protein per g of BChl c, a value that is in good agreement
with previous measurements (0.23 g of protein per g of BChl c
[32]) . CsmA is the most abundant chlorosome
protein and accounts for about one-third to one-half of the total
chlorosome envelope protein (4) . Thus, the absence
of one of the other chlorosome proteins would not be expected to
affect the total protein content significantly . The BChl a
content of wild-type chlorosomes was about 12 mg per g of BChl c,
and this value did not vary significantly in most of the mutants .
However, chlorosomes from the csmC mutant contained roughly
one-third less BChl a than wild-type chlorosomes did . The
carotenoid contents of wild-type chlorosomes and all mutant
chlorosomes were about 60 to 70 mg per g of BChl c, except for
the csmB mutant, which produced chlorosomes containing significantly
( 25%)
fewer carotenoids . HPLC analyses suggested that this decrease in the
csmB mutant was due to a decrease in all carotenoid species
rather than to a decrease in a specific carotenoid species . HPLC
analyses of whole-cell extracts showed that roughly 50% of the
cellular BChl a and about 80% of the cellular carotenoids were
contained in the chlorosomes in all strains .
| TABLE 2 . Characterization of chlorosomes isolated from the wild-type
strain and csm mutants of C . tepiduma
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The quinone content of wild-type chlorosomes (10 mg of menaquinone
and 53 mg of chlorobiumquinones [chlorobiumquinone and 1'-hydroxymenaquinone]
per g of BChl c) is similar to previous measurements (14,
15) . Chlorosomes of the nine mutant strains had
similar menaquinone contents . However, the mutant chlorosomes
consistently had significantly lower or, at most, similar
chlorobiumquinone contents (Table 2 and Fig.
4) . The total chlorobiumquinone content was varied
among batches of chlorosomes from the mutants, and no other obvious
pattern relating to the absence of a specific protein emerged from
the data . The content of isoprenoid quinones in chlorosomes from the
wild-type strain has also been observed to vary from batch to batch,
and this variation may be due to subtle variations in growth
conditions (e.g., small differences in levels of oxygen exposure in
the cultures) .
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FIG . 4 . Correlation between the fluorescence emission intensity under
oxidizing conditions (Fox) and the chlorobiumquinone
(CK) contents in chlorosomes . Each letter refers to a separate
chlorosome preparation (W, wild type; other letters refer to csm
mutants).
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The absorption maximum for BChl c in the wild-type chlorosomes
was about 745 nm, and the BChl c absorption maxima were not
significantly different from this value in the chlorosomes of most of
the mutant strains . However, consistent with previous results (9),
chlorosomes from the csmC mutant had an absorption maximum
that was blue-shifted by about 8 nm (Table 2) . HPLC
analysis determined that the distributions of C-8 and C-12 methylation
homologs of BChl c were not significantly different between
the wild-type strain and any of the csm mutants . Thus, a difference
in BChl c methylation cannot explain the altered absorbance
properties of the chlorosomes of the csmC mutant . These results
indicate that the organization of the BChl c aggregates was
not significantly altered in the chlorosomes of any mutant strain
except the one lacking CsmC .
In general, the amplitudes, shapes, and maxima of the fluorescence
emission spectra were similar for chlorosomes from the wild-type
strain and the various mutant strains (Table 2) . The
observation that both BChl c and BChl a fluorescence
emissions were similar in the wild-type and mutant strains indicates
that the organization of these pigments and the energy transfer
between them were largely unaffected in the chlorosomes of the
mutants . The only exception to this statement relates to the
chlorosomes from the csmC mutant; the BChl c emission
peak was blue-shifted about 3 nm for these chlorosomes (Table
2) . In spite of the decreased level of BChl a
in these chlorosomes (Table 2), no significant
changes in the BChl a fluorescence of these chlorosomes or of
the chlorosomes from any other mutant were detected (data not shown) .
Although the fluorescence emission intensities were similar under
oxidizing conditions, one difference that was correlated with the
total content of chlorobiumquinones was observed . Figure
4 shows the correlation between the relative
fluorescence emission amplitude and the total contents of chlorobiumquinones
from 20 different chlorosome preparations . In order to account
for the natural variation in chlorobiumquinone contents, two samples
for the wild-type strain and two samples for each mutant were
analyzed . Previous observations have shown that chlorobiumquinones
(and chemically related compounds) are better fluorescence quenchers
than menaquinone (14, 16,
28), and thus the total chlorobiumquinone content should be
inversely related to the fluorescence emission intensity under
oxidizing conditions . As shown in Fig . 4, this is
indeed the case . These observations strongly support the hypothesis
that chlorobiumquinones are the components responsible for the redox
regulation of energy transfer in chlorosomes in green sulfur bacteria
(14-16, 28) .
Estimation of protein numbers in wild-type chlorosomes. In
attempting to characterize the chlorosome proteins and their
functions, it is useful to estimate the level of each protein in an
average chlorosome and to compare that value to the amounts of other
chlorosome components . A chlorosome from C . tepidum contains
about 200,000 BChl c molecules (22) and, assuming a
BChl a-to-BChl c ratio of about 0.012 (wt/wt) (Table
2), also contains roughly 2,200 BChl a
molecules . The protein-to-BChl c ratio in chlorosomes is about
0.25 (wt/wt) (32) (Table 2) . As
estimated previously (4, 19), about
one-third to one-half of this protein is CsmA (i.e., about 0.1
[wt/wt] on a BChl c basis), which corresponds to about 2,700
CsmA molecules per chlorosome . This number is in excellent agreement
with the suggestion that CsmA binds BChl a at a 1:1 ratio and
that there are about 2,700 CsmA-BChl a complexes per
chlorosome (4, 23, 26) .
Based upon the staining intensities of the various constituent
polypeptides on SDS-PAGE gels, a rough estimate of the
stoichiometries of the remaining proteins on a weight basis is as
follows . There are about 1,000 copies of CsmB; 300 copies of CsmC and
CsmD; 200 copies of CsmE and CsmF; 100 copies of CsmH, CsmI, and
CsmJ; and 20 copies of CsmX per chlorosome . Thus, an average
chlorosome envelope contains about 5,000 protein molecules . The data
in Table 2 indicate that the numbers of carotenoid,
chlorobiumquinone, and menaquinone molecules per chlorosome are about
20,000, 15,000 and 3,000, respectively .
Only four of the csm mutants generated in this work (the csmB,
csmC, csmH, and csmJ mutants) exhibited convincing
phenotypes . Among the properties studied here, no characteristics
were found in the csmD, csmE, csmF, csmI,
and csmX mutants that distinguished them from the wild-type
strain . The csmB mutant cells and chlorosomes contained about
25% less carotenoid than the wild-type strain (Table 2),
which suggests that CsmB may play a role in organizing the
carotenoids in chlorosomes . The only phenotype found in the csmH
mutant was that the chlorosomes were about 20% shorter than those
from the wild-type strain (Fig . 2), which suggests
that CsmH, together with CsmC (see below), plays a role in determining
the lengths of the BChl c aggregates . The csmJ mutant had
slightly decreased growth rates at saturating and inhibitory light
intensities . Because CsmJ is an iron-sulfur protein with a redox
potential of about +90 mV (T . W . Johnson et al., unpublished data),
it is possible that this protein directly or indirectly affects
the turnover of photosynthetically generated reductants and
that its absence may have an adverse effect on growth at high light
intensities .
The only mutant with a more extensive phenotype was the csmC
mutant . Compared to wild-type chlorosomes, chlorosomes isolated
from this mutant were about 25% shorter (Fig . 2) and had
blue-shifted BChl c absorption and fluorescence (Table
2) . Thus, CsmC is the only protein whose absence
seemed to affect BChl c organization . The small growth rate
defect in this mutant at a limiting light intensity may be caused by
the alteration in BChl c absorption, which might be correlated
with a decreased light-harvesting efficiency . However, the reduced
growth rate could also be due to the smaller size of the chlorosome .
It is not clear how CsmC causes this effect . CsmC does not have a
histidine residue, which is the most common ligand to chlorophylls in
chlorophyll-binding proteins . It is noteworthy that the vestigial
chlorosomes (designated carotenosomes) of a bchK mutant of
C . tepidum that completely lacks BChl c also lack CsmC (18;
Frigaard et al., unpublished) . Observations for acetylene-treated
Chlorobium vibrioforme cells also suggest a link between BChl
c and CsmC . Acetylene specifically inhibits BChl c
biosynthesis and causes the formation of abnormally small chlorosomes
in green sulfur bacteria (31) . However, the
cellular levels of most chlorosome proteins are not significantly
affected, and the chlorosome envelope seems to form normally even
though the BChl c content decreases nearly 10-fold (31) .
A notable exception is that the cellular level of CsmC significantly
increases in acetylene-treated cells . These results together
suggest that CsmC and BChl c somehow interact and that changing
the level of one affects the other .
How the small pool of BChl a in chlorosomes is organized is
still not absolutely clear . However, since the levels and functional
properties of BChl a in all of the csm mutants are similar to
those in the wild-type strain, it is extremely unlikely that
the nine eliminated Csm proteins bind BChl a or are necessary
for its organization . Recent analyses of C . tepidum chlorosomes
have shown that CsmA and BChl a are present in approximately
equimolar amounts and that BChl a remains in the chlorosomes
after the detergent-mediated extraction of all chlorosome proteins
except CsmA (4) . A subsequent treatment, which
solubilizes CsmA from the chlorosome envelope without solubilizing
the BChl c aggregates, also causes the release of BChl a .
Since the spectroscopic properties of BChl a strongly suggest
that it is protein bound, CsmA is the only candidate for the BChl
a-binding protein . Montańo et al . (23) have
recently shown CsmA to be a BChl a-binding protein in
chlorosomes from the green filamentous bacterium Chloroflexus
aurantiacus .
The absence of phenotypic effects in chlorosomes lacking a single
protein could be due partly to the large number of protein types
found in chlorosomes from C . tepidum . Although the chlorosome
envelope contains 10 different proteins, these proteins can be
classified into only four motif families (32) . Thus, it is
possible that some of the proteins can substitute for others
and that obvious phenotypes will appear only if all proteins of a
motif family are eliminated in the same cell . For example, CsmB and
CsmF are about 40% similar in sequence, and CsmE is about 50%
identical in sequence to CsmA and has a conserved histidine residue
that could in principle serve as a ligand to BChl a (32) .
However, these proteins are present in very different amounts (about
5 times more CsmB than CsmF and about 14 times more CsmA than CsmE),
and the level of one does not change when the other is eliminated
(Fig . 3) . In addition, since the inactivation of
csmA appears to be lethal, or at least very difficult to achieve,
CsmE can evidently not substitute for CsmA functionally or
structurally . Nevertheless, due to the high sequence similarity, the
possibility that CsmE binds a small, expendable pool of BChl a
cannot be rigorously excluded . We are currently attempting to produce
mutants of C . tepidum in which multiple genes have been
inactivated . Technically, the maximum number of genes which can be
inactivated in a given mutant strain is presently limited by the
number of selective markers available (three) and by the degree of
clustering of target genes (Fig . 1) .
In spite of the phenotypes observed for four of the csm mutants,
no csm mutant had a severe growth rate defect, and all mutants
developed chlorosomes that were functionally and structurally
indistinguishable from or similar to those from the wild-type strain .
We therefore conclude that when they are eliminated individually,
none of the nine chlorosome proteins whose genes were inactivated in
this study are essential for the biogenesis, stability, or
light-harvesting function of chlorosomes and their BChl c
aggregates . This is a remarkable result, since the same suite of 10
envelope proteins are found in the chlorosomes from C . tepidum
(containing BChl c), from C . vibrioforme (containing
BChl d), and from Chlorobium phaeobacteroides (containing BChl
e) (17, 31) . These results
demonstrate the remarkable robustness of the chlorosome design and
are consistent with the fact that chlorosomes are an important
determinant of the ability of these cells to grow at exceedingly low
light intensities . The results of the present study are also
consistent with those of previous studies that have concluded that
pigment-pigment interactions, not pigment-protein interactions, are
of principal importance in the structural and spectroscopic
properties of the BChl c aggregates in chlorosomes (2,
3, 24) . No other antenna structure
in biology shows such a remarkable indifference towards the
inactivation of the genes encoding its principal constituent protein
species .
This work was supported by grant DE-FG02-94ER20137 to D.A.B . from the
U.S . Department of Energy . N.-U.F . was supported by a grant from the
Danish National Science Research Council .
We thank two anonymous reviewers for very helpful comments that
improved the manuscript .
* Corresponding author . Mailing address: 232 South Frear
Building, Department of Biochemistry and Molecular Biology, The Pennsylvania
State University, University Park, PA 16802 . Phone: (814) 863-7405 . Fax: (814)
863-7024 . E-mail: nxf10@psu.edu.
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