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Journal of Bacteriology, February 2004, p . 785-793, Vol . 186,
No . 3
A
Predicted ABC Transporter, FtsEX, Is Needed for Cell Division in Escherichia
coli
Kari L . Schmidt,1 Nicholas D . Peterson,1 Ryan
J . Kustusch,1 Mark C . Wissel,1 Becky Graham,2,
Gregory J . Phillips,2 and David S . Weiss1*
Department of Microbiology, University of Iowa, Iowa City, Iowa 52242,1
Department of Veterinary Microbiology, Veterinary Medical Research Institute,
Iowa State University, Ames, Iowa 50011-12402
Received 22 July 2003/ Accepted 20 October 2003
FtsE and FtsX have homology to the ABC transporter superfamily of
proteins and appear to be widely conserved among bacteria . Early work
implicated FtsEX in cell division in Escherichia coli, but
this was subsequently challenged, in part because the division
defects in ftsEX mutants are often salt remedial . Strain RG60
has an ftsE::kan null mutation that is polar onto
ftsX . RG60 is mildly filamentous when grown in standard Luria-Bertani
medium (LB), which contains 1% NaCl, but upon shift to LB with
no NaCl growth and division stop . We found that FtsN localizes to
potential division sites, albeit poorly, in RG60 grown in LB with 1%
NaCl . We also found that in wild-type E . coli both FtsE and
FtsX localize to the division site . Localization of FtsX was studied
in detail and appeared to require FtsZ, FtsA, and ZipA, but not the
downstream division proteins FtsK, FtsQ, FtsL, and FtsI . Consistent
with this, in media lacking salt, FtsA and ZipA localized
independently of FtsEX, but the downstream proteins did not . Finally,
in the absence of salt, cells depleted of FtsEX stopped dividing
before any change in growth rate (mass increase) was apparent . We
conclude that FtsEX participates directly in the process of cell
division and is important for assembly or stability of the septal
ring, especially in salt-free media .
In Escherichia coli, the division septum forms via the coordinated
inward growth of all three layers of the cell envelope—the
cytoplasmic membrane, the peptidoglycan wall, and the outer membrane .
To date, about a dozen E . coli genes are known to be
specifically required for septation (3, 11) .
These genes share two important properties: (i) loss of function
mutations result in the formation of long, aseptate filaments with
regularly spaced nucleoids (the fts, or filamentation
temperature-sensitive phenotype), and (ii) the proteins encoded by
these genes localize to the division site . Because cell division
genes are generally essential and because lesions in many
housekeeping genes can affect cell division indirectly, there have
not been any exhaustive screens for division mutants . Thus, it seems
likely that more division genes remain to be described .
A number of mutant hunts, starting with the pioneering work of
Hirota and coworkers in the 1960s, suggested that there is an
important cell division gene located at about 76 min on the E .
coli chromosome (30) . This locus was originally
designated ftsE . One interesting property of ftsE
mutants is that many are salt remedial, meaning that viability is
restored by inclusion of NaCl in the growth medium . The amount of
salt required for rescue is strain dependent, but generally in the
range of 0.5% . Studies by Salmond and colleagues in the 1980s
revealed that "ftsE" comprised two genes, which were then
designated ftsE and ftsX (13) .
Moreover, the sequence of these genes revealed clear homology to ABC
transporters; FtsE is the ATP-binding cassette (ABC) component, while
FtsX is the membrane component . ABC transporters use energy from ATP
to transport a wide variety of substrates either into or out of cells
(or subcellular compartments) . These observations led to the proposal
that FtsEX transports an ion needed for division but not for growth
per se (13) .
Subsequently, Woldringh and colleagues questioned whetherftsE
is really a division gene, after studying one allele and finding
that this mutant produced filaments in broth but not minimal
medium (34) . Their thinking was influenced by having just
completed a study of ftsB, which only filamented at high
growth rates and turned out to be an allele of nrd, a gene
needed for synthesis of DNA precursors (35) . The
view that ftsEX affects cell division indirectly seems to have
gained ascendancy, as most of the review articles on bacterial cell
division published in the last 10 years make no mention of ftsE
or ftsX (e.g., references 11,
22, and 31), and recent work in E . coli
has explored potential connections to membrane protein insertion (10,
37) . During this same time period, however,
mutants of ftsE and/or ftsX have been reported in
Flavobacterium, Neisseria, and Aeromonas (2,
20, 24) . Interestingly, these
mutants are viable but have morphological defects suggestive of
impaired division .
Here we report on experiments intended to determine whether FtsE
and FtsX participate directly in cell division in E . coli . Our
findings establish that FtsE and FtsX are bona fide division
proteins .
Strains. Strains used in this study are listed in Table
1 . RG60 has been described previously (10) .
Phage P1 grown on RG60 was used to transduce MG1655/pDSW610 to Kanr
to create EC1335 . EC1335 was transduced to Ampr with P1
phage grown on EC447, EC436, EC535, and EC442 (8,
23, 38) to create EC1363, EC1366, EC1391,
and EC1392, respectively . EC1335 was transformed with pCH205 (18)
to create EC1386 . EC1063 and EC1065 are derivatives of MG1655
and were constructed from pDSW513 and pDSW512 using
InCh1
pSX102(Ampr) (5) . EC1116 was constructed
by integrating pDSW533 into att 80
of MG1655 (16) . EC1116 was transduced to Tetr
with P1 grown on MM61 [ftsA12(Ts) leu::Tn10] or
DRC14 [ftsZ84(Ts) leu::Tn10] to create EC1152
and EC1158, respectively . EC1159 was constructed by transducing
EC1116/pDSW406 to Kanr with P1 grown on EC912 (23) .
EC1179, EC1180, and EC1181 were constructed by integrating pDSW533
into att 80
of JOE170, JMG265, and EC549 (8, 12,
38) . EC1295 was constructed by transducing JOE563
(7) to Kanr with P1 grown on EC1063 .
EC1340 was constructed by transducing PS223 (28)
to Kanr with P1 grown on EC1065 . EC1384 was constructed by
transforming DHB4 (5) with pDSW609 .
| TABLE 1 . Strains and plasmids
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Plasmids. Plasmid pDSW512 (P206-gfp-ftsX) was
constructed by amplifying ftsX from the chromosome of MG1655
using primers P481 (CGAGAATTCAACAACAACGTCACTTGCATGGAGGCGTGG)
and P482 (TGCTCTAGATATTCAGGCGTAAAGTGGCG) . The 1,111-bp product
was cut with EcoRI and XbaI (sites underlined) and ligated into
the same sites of pDSW286, a Kanr derivative of pDSW209 (38) .
pDSW513 (P204-ftsX-gfp) was constructed similarly using
primers P483 (CAGGAATTCGTCACTTGCATGGAGGCGTGG) and P484 (CTGCTGCAGGTTGTTGTTTTCAGGCGTAAAGTGGCGTAA),
with the product being cloned into the EcoRI-PstI sites of
pDSW256, a Kanr derivative of pDSW208 (38) .
To construct pDSW533 (P206-gfp-ftsX, Spcr,
attP 80),
pDSW512 was digested with MunI and XbaI, and the
1,252-bp fragment carrying ftsX was isolated and ligated into
the same sites of pJC118 (7) . Plasmid pDSW609 was constructed
in several steps . First, the triple hemagglutinin (HA) tag was
PCR amplified from pMYP-3xHA (32) using primers P578
(catggaggcgtgggccatgaaaacaacaacTCTAGATACCCATACGATGTTCCTGAC) and P577
(CTGAAGCTTACTaAGCAGCGTAATCTGGAACGTC) . The upstream primer has
20 bases homologous to the 3' end of ftsE (lowercase letters),
omitting the stop codon . The resulting 144-bp product was isolated
and used as a primer in a second PCR together with P579 (CACGAATTCATAACACTTTTTGCCCGAGAGGATTAAC),
which anneals to the 5' end of ftsE . This reaction produced a
742-bp ftsE-3xHA fusion product that was digested with EcoRI
and HindIII (sites underlined in P579 and P577) and ligated
into the same sites of pTH18kr (19) . Plasmid
pDSW610 (pBAD33-ftsEX) was constructed in two steps . First,
ftsEX was amplified from the chromosome of MG1655 with primers
P477 (CAGCCATGGTTCGCTTTGAACATGTCAGC) and P488 (GTCAAGCTTATTCAGGCGTAAAGTGGCGT) .
The 1,734-bp product was cut with NcoI and HindIII
(sites underlined) and ligated into the same sites of pBAD24 (15)
to create pDSW519 . Then, the 1,799-bp BamHI-HindIII
fragment carrying ftsEX from pDSW519 was moved into the same
sites of pBAD33 (15) to create pDSW610 . The
ftsX gene was deleted from pDSW610 by digestion with PshAI
and HindIII, followed by treatment with T4 DNA polymerase, and
then ligation to create pDSW620 (pBAD33-ftsE) . Similarly, ftsE
was deleted by digesting pDSW610 with PciI and SphI,
treatment with T4 DNA polymerase, and ligation to create pDSW621
(pBAD33-ftsX) . Plasmid pDSW636 (P206-gfp-ftsX)
was constructed by ligating the 1,098-bp EcoRI-XbaI
fragment carrying ftsX from pDSW512 into pDSW209 (38) .
The 1,095-bp EcoRI-PstI fragment carrying ftsX
from pDSW513 was ligated into the same sites of pDSW210 (38)
to create pDSW637 (P206-ftsX-gfp) . Plasmid pDSW638 (P206-ftsE-3xHA)
was constructed by cloning the 790-bp EcoRI-HindIII fragment
carrying ftsE with three tandem repeats of the HA epitope tag
into the same sites of pDSW206 .
Media, chemicals, and molecular biological procedures.
Luria-Bertani medium (LB) consisted of 10 g of tryptone, 5 g of yeast
extract, and 10 g of NaCl (1% NaCl) and, for plates, 15 g of agar per
liter . LB always contained 1% NaCl except where stated that it was
omitted . Antibiotics were used at the following concentrations: 40 µg
of kanamycin/ml, 30 µg of chloramphenicol/ml, 50 µg of
spectinomycin/ml . L-Arabinose and
D-glucose were used at 0.2%, unless otherwise indicated,
to modulate expression from the araBAD promoter PBAD .
Isopropyl-ß-D-galactopyranoside (IPTG) was
added at the following concentrations: 5 µM (gfp-ftsI), 1 mM (zipA-gfp),
100 µM (ftsA-gfp), 50 µM (ftsX-gfp), 100 µM (gfp-ftsX),
40 µM (ftsK (1-266)-gfp), or 10 µM (gfp-ftsQ) . Enzymes
used to manipulate DNA were from New England Biolabs (Beverly,
Mass.) . Oligonucleotides were from Integrated DNA Technologies
(Coralville, Iowa) . DNA sequencing was performed by the DNA Core
Facility of the University of Iowa . All constructs made by PCR were
sequenced to verify their integrity .
Depletion of FtsEX. A culture of EC1335 (ftsE::kan/pBAD33-ftsEX)
was grown overnight at 30°C in 5 ml of LB containing kanamycin,
chloramphenicol, and arabinose . The next morning, this culture was
diluted 1:20 into LB with no NaCl but containing kanamycin,
chloramphenicol, 0.02% arabinose, and 0.2% glucose . This culture was
grown at 30°C for 2 h to an optical density at 600 nm (OD600)
of
0.5 .
Cells were washed to remove sugars by pelleting 1 ml of culture in a
microcentrifuge and resuspending in 1 ml of LB with no NaCl . The
washed cells were diluted 1:150 into a flask of LB with no NaCl but
containing chloramphenicol and either arabinose or glucose . Growth
and cell morphology were monitored periodically by the OD600
and with microscopy, respectively .
Localization of GFP fusions to FtsX. Strains EC1063 (P204-ftsX-gfp)
and EC1065 (P206-gfp-ftsX) are MG1655 derivatives
that harbor fusions of gfp to ftsX integrated into the
chromosome in single copy at the
attachment site . These strains were grown overnight at 30°C in
LB-kanamycin . The next morning cultures were diluted 1:1,000 into LB
without antibiotic but containing IPTG to induce expression of the
gfp fusion, and cultures were grown to an OD600 of
0.3
and then fixed in the growth medium with cross-linking agents and
processed for fluorescence microscopy as described previously (38) .
Dependence of green fluorescent protein (GFP)-FtsX localization on
other division proteins was determined in strains that harbored
conditional alleles of these proteins . Growth of such strains under
permissive and nonpermissive conditions has been described elsewhere
(38) . Briefly, cultures were grown in LB with IPTG
to induce the gfp fusion and antibiotics to maintain any
plasmids until early exponential phase, at which time cultures were
shifted to the nonpermissive condition . Cells were fixed when they
appeared filamentous . Typically, this was 1 h after shift to 42°C
for Ts mutants and 4 h after dilution into glucose-containing
medium for arabinose-dependent depletion strains .
Localization of GFP-Fts fusions in an FtsEX depletion background.
Fusions of gfp to various division genes were introduced into
the FtsEX depletion strain EC1335 by transduction or transformation .
Depletion of FtsEX was done in LB with no NaCl as described above,
except that the medium contained IPTG to induce the respective gfp
fusion . Cells were fixed when the glucose-grown culture became
filamentous and were examined by fluorescence microscopy .
Localization of FtsE-3xHA. A culture of DHB4/pDSW609 (Plac-ftsE-3xHA)
was grown overnight at 30°C in LB with kanamycin . This culture was
diluted 1:200 into LB with 100 µM IPTG and grown at 30°C to an OD600
of
0.5 .
Then, cells were fixed and processed for immunofluorescence
microscopy as described previously (33) . FtsE-3xHA was
detected with anti-HA monoclonal antibody (HA.11; BabCo, Berkeley,
Calif.) diluted 1:200 and incubated overnight, followed by goat
anti-mouse antibody conjugated to Alexa488 (Molecular Probes, Eugene,
Oreg.) diluted 1:200 and incubated for 2 h .
Localization of FtsN by immunofluorescence microscopy.
Wild-type MG1655 or ftsE::kan mutant RG60 cells grown at 30°C
in LB with 1% NaCl were fixed with cross-linking agents and
processed for immunofluorescence as described previously (29) .
Purified anti-FtsN serum (39) was used at a dilution of
1:500 overnight at 4°C . The secondary antibody was goat anti-rabbit
conjugated to Texas Red (Molecular Probes) at 1:400 for 2 h .
Localization of FtsN in RG60. Strain RG60 has been described
elsewhere (10) . It is an MG1655 derivative with an
ftsE::kan insertion, now designated ftsE400::kan,
that is predicted to be polar onto ftsX . RG60 was reported to
be filamentous and required at least 0.5% NaCl for viability .
Other electrolytes found to rescue RG60 on plates included NaH2PO4,
Na2SO4, KCl, NH4Cl, and CaCl2,
but not K2SO4, MgSO4, or MnCl2 .
Osmolytes such as sucrose, glycine betaine, and proline also
failed to rescue RG60 .
We found that RG60 grew somewhat slowly and was mildly filamentous
in standard LB broth, which contains 1% NaCl (Fig . 1A) . These
defects were more pronounced at elevated temperatures . Upon
shift to LB broth that lacked NaCl, growth and division essentially
stopped .
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FIG . 1 . (A) Effect of salt and temperature on growth of RG60 . RG60 (ftsE400::kan)
growing in LB with 1% NaCl at 30°C was subcultured into LB with 1%
(circles) or no (squares) NaCl at 30°C (open symbols) or 37°C (closed
symbols) . The inset shows a phase-contrast micrograph of cells harvested
at the time indicated by the arrow from the cultures growing with salt .
(B) Localization of FtsN . Cells of wild type (MG1655) or RG60 in
exponential growth in LB with 1% NaCl at 30°C were fixed, and FtsN was
visualized by immunofluorescence microscopy . Arrows point to septal
localization of FtsN.
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We attempted to transduce various gfp-fts fusion genes into
RG60 so that we could determine whether the division block in this
strain occurs before, during, or after assembly of the septal ring .
These efforts were generally unsuccessful, although we could move the
fusions into the parental strain, MG1655 (data not shown) . Other
approaches, such as transducing the ftsE400::kan allele
into the gfp fusion strains or transforming RG60 with plasmids
that express the fusions, also failed . In some cases we simply never
recovered transductants or transformants, while in others we could
recover them and confirm by PCR that they were correct, but they had
a small colony phenotype and lysed when grown in broth, even with
high salt . These findings suggest that the gfp-fts fusion
genes are toxic when combined with the ftsE::kan
mutation, which is somewhat surprising because they are not very
toxic in a wild-type background and some of them, like gfp-ftsI,
complement (38) .
Ultimately, we were able to use immunofluorescence microscopy to
show that FtsN, a late recruit to the division site (1),
can localize in RG60 grown under permissive conditions (1% NaCl,
30°C) . About 60% of the RG60 cells exhibited FtsN localization,
compared to about 35% of the cells of a wild-type control strain,
MG1655 (Fig . 1B) . However, the RG60 cells are long enough that
close to 100% should exhibit FtsN localization if the ftsE::kan
mutation has no effect on assembly or stability of the septal
ring . Thus, FtsE improves, but is not required for, assembly or
stability of the septal ring . This finding is consistent with RG60
having a leaky division defect .
Depleting cells of FtsEX blocks cell division. It is not
obvious why an ABC transporter would be needed specifically for cell
division, and strain RG60 grows poorly even in the presence of salt .
These considerations suggested that the division defect in RG60 might
be a secondary consequence of a metabolic defect that renders the
cells generally unhealthy . We therefore constructed a strain, EC1335,
in which FtsEX expression is under control of an arabinose-dependent
promoter, PBAD (15) . In the presence of
glucose, which prevents ftsEX expression, EC1335 formed
colonies on LB plates that contained 1% NaCl, but not on LB plates
that lacked NaCl . Colony formation in the absence of NaCl was rescued
by arabinose . To investigate the relationship between cell division
and overall health, EC1335 was grown in LB broth with no salt but
containing 0.2% arabinose or 0.2% glucose . Both cultures grew at the
same rate as judged by OD600, but the glucose-grown cells
stopped dividing after about 2 h and were clearly filamentous after
about 3.5 h (Fig . 2) . We conclude that the division
defect is a primary defect rather than a secondary consequence of the
cells becoming unhealthy .
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FIG . 2 . Effect of FtsEX depletion on growth and division . EC1335 (ftsE::kan/pBAD33-ftsEX)
was grown in LB with no NaCl but containing either arabinose (closed
symbols) or glucose (open symbols) to modulate expression of the
plasmid-borne ftsEX genes . Samples were removed periodically to
monitor growth by OD600 or cell morphology . The inset shows a
phase-contrast micrograph of cells harvested at the time indicated by
the arrow.
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FtsE and FtsX localize to the division site. To determine
whether FtsE and FtsX localize to the division site, we fused ftsE
and ftsX to gfpmut2 (9), which encodes a
bright variant of GFP . The fusion genes were integrated into
the chromosome at the
attachment site by selecting for a tightly linked kanamycin
resistance marker (5) . Expression of the gfp
fusions was under control of an IPTG-inducible promoter . Strains were
grown in LB containing IPTG to an OD600 of
0.3,
fixed with cross-linking agents, and examined by fluorescence
microscopy . With FtsX-GFP and GFP-FtsX, about half of the cells had a
bright band of fluorescence at the midcell (Fig . 3A and
B) . More precisely, the fraction of cells exhibiting septal
localization was about 40% in an MG1655 background and about 60% in
an MC4100 background . No other sites of localization were apparent .
Convincing localization of GFP-FtsE and FtsE-GFP was not observed,
perhaps because GFP interferes with the proper function of this
protein . We therefore constructed a low-copy plasmid that expressed
ftsE with three tandem copies of an HA epitope tag at the C
terminus (32) . Immunofluorescence microscopy
revealed septal localization of the FtsE-3xHA fusion in about 50% of
the cells (Fig . 3C and D) . Similar fluorescent
bands were not observed unless production of FtsE-3xHA was induced
with IPTG, verifying the specificity of the antibodies used to detect
the tagged protein . Cells with FtsE and FtsX at the midcell were on
average longer than those without (Fig . 3E),
indicating that these proteins are recruited to the division site
during the later stages of cell growth and remain there until
division is complete .
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FIG . 3 . Localization of FtsE and FtsX to the division site . (A to D)
Cells in exponential growth in LB with NaCl were fixed and examined by
fluorescence microscopy directly (A and B), by indirect
immunofluorescence microscopy (C and D), or by phase-contrast microscopy
(C' and D') . Strains shown are EC1063 (P204-ftsX-gfp)
(A); EC1065 (P206-gfp-ftsX) (B); DHB4/pDSW609
(Plac-ftsE-3xHA) (C and D) . (E) Relationship between
cell length (age) and septal localization of FtsX . 509 cells of EC1063
were measured and scored for the presence (closed symbols) or absence
(open symbols) of a fluorescent band at the midcell.
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Complementation tests were used to determine whether the fusion genes
used in the localization studies encoded functional division
proteins . This was done by cloning the fusion genes into plasmids
that confer Ampr and express the fusions under control of a
weak IPTG-inducible promoter . Plasmids that express gfp-ftsX
or ftsX-gfp rescued growth of RG60 on LB plates lacking NaCl
when cotransformed with pBAD33-ftsE (Table 2) .
Likewise, a plasmid that expressed ftsE-3xHA rescued RG60 when
cotransformed with pBAD33-ftsX . We conclude that our fusions
to ftsE and ftsX function in cell division . Moreover,
these results confirmed the expected polarity of ftsE400::kan
onto ftsX, since expression of ftsE alone was not
sufficient to rescue RG60 .
| TABLE 2 . Complementation of the ftsE400::kan allele in
RG60a
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Position of FtsX in the recruitment pathway. Numerous studies
of Fts protein localization in E . coli have revealed a set of
dependencies that are generally interpreted to reflect the order of
assembly of these proteins into a multiprotein complex, sometimes
called the septal ring (reviewed in references 11,
22, and 31) . The first protein to localize
is FtsZ, which polymerizes into a ring on the inner surface of the
cytoplasmic membrane . FtsA, ZipA, and ZapA (14)
bind directly to FtsZ and localize next . Then come FtsK, FtsQ,
FtsL/YgbQ (probably as a complex), FtsW, FtsI, FtsN, and AmiC . To
determine where FtsX fits into this hierarchy, we examined the
effects of inactivation of various fts genes on septal
localization of FtsX fused to GFP . We also did a complementary set of
experiments that investigated which Fts proteins do and do not
localize properly upon depletion of FtsEX .
We introduced our fusions into strains that had conditional
alleles of ftsZ, ftsA, zipA, ftsK, ftsQ,
ftsL, or ftsI . Because several of these conditional
mutants have kanamycin resistance elements inserted into the gene of
interest, we subcloned our original gfp-ftsX fusion,
which was linked to a kanamycin marker, into a plasmid that confers
spectinomycin resistance (7) . This plasmid,
pDSW533, was then integrated into the chromosome of MG1655 at the
attachment site for phage
80
as described elsewhere (16) to create strain
EC1116 . About half the cells of EC1116 displayed localization of
GFP-FtsX to the septal ring (Table 3), as was
observed for the same fusion integrated at the phage
attachment site in EC1065 (Fig . 3B) .
| TABLE 3 . Localization of GFP-FtsX or FtsX-GFP in fts mutant
backgroundsa
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Localization of GFP-FtsX was then assayed in filaments that formed
upon inactivation or depletion of the indicated essential division
proteins . These results are summarized in Fig . 4 and
Table 3 . GFP-FtsX did not localize in filaments that
developed when FtsZ ring formation was inhibited by shift of an
ftsZ(Ts) mutant to the nonpermissive temperature . Similar results
were obtained when FtsZ ring assembly was blocked by induction of
the FtsZ-binding protein sulA (25,
36) from a pBAD plasmid (38) in
cells maintained at 30°C (data not shown) . Inactivation of the
zipA1(Ts) allele, or depletion of ZipA (17) (data not
shown), also greatly reduced localization of GFP-FtsX . Similarly,
GFP-FtsX localized poorly in an ftsA12(Ts) background at the
nonpermissive temperature . Although some GFP-FtsX localization
was seen in the ftsA12(Ts) filaments, these bands were invariably
faint (e.g., Fig . 4B, top filament) . Whether this
residual localization reflects leakiness of the Ts phenotype or a
small degree of FtsA independence is not known . In contrast, most
filaments formed by depleting cells of FtsK contained multiple
fluorescent bands that were as bright as those seen in dividing
cells . Likewise, GFP-FtsX localized well in filaments depleted of
FtsQ, FtsL, or FtsI . Taken together, these results imply that FtsX
localizes after FtsZ, FtsA, and ZipA, but before FtsK and subsequent
proteins .
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FIG . 4 . Effect of fts mutations on localization of FtsX to
potential division sites in filamentous E . coli cells . Strains
induced to express GFP-FtsX or FtsX-GFP were grown under nonpermissive
conditions until they became filamentous, at which time they were fixed
and examined by fluorescence microscopy to visualize GFP . Relevant
division mutations are as follows: ftsZ84(Ts) in EC1158 (A),
ftsA12(Ts) in EC1152 (B), and zipA1(Ts) in EC1340 (C); and
FtsK depletion in EC1295 (D), FtsQ depletion in EC1179 (E), FtsW
depletion in EC1159 (F), and FtsI depletion in EC1181 (G) . The arrowhead
in panel B points to a faint band sometimes observed in ftsA(Ts)
filaments . 4',6'-Diamidino-2-phenylindole staining was done to verify
proper nucleoid segregation (data not shown).
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To determine which Fts proteins are dependent upon FtsEX for septal
localization, we constructed a set of FtsEX depletion strains that
harbored gfp fusions to various division genes . The results
are summarized in Fig . 5 and Table 4 .
Depletion of FtsEX had only a minimal effect on localization of FtsA
and ZipA . In contrast, localization of FtsK, FtsQ, and FtsI was
markedly reduced in FtsEX depletion filaments, and the occasional
fluorescent bands observed were quite faint . Sporadic localization
of small amounts of FtsK, FtsQ, and FtsI might reflect partial
assembly of the septal ring in the absence of FtsEX . Alternatively,
there might be some residual FtsEX in the filaments . In either case,
these findings imply that FtsEX localizes after FtsZ, FtsA, and ZipA,
but before FtsK and other downstream proteins, and are consistent
with the behavior of the GFP-FtsX protein in fts mutant
backgrounds (see above) .
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FIG . 5 . Localization of various division proteins after depletion of
FtsEX . The strains used express ftsEX under control of an
arabinose-dependent promoter and harbor gfp fusions to different
division genes . These strains were grown in parallel in media containing
arabinose (short cells) or glucose (filaments) and then fixed and
examined by fluorescence microscopy to visualize GFP . (A and B) FtsA-GFP
in EC1363; (C and D) ZipA-GFP in EC1391; (E and F) FtsK (1-266)-GFP in
EC1386; (G and H) GFP-FtsQ in EC1392; (I and J) GFP-FtsI in EC1366 .
4',6'-Diamidino-2-phenylindole staining was done to verify nucleoid
segregation (data not shown).
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| TABLE 4 . Localization of Fts proteins in FtsEX depletion backgrounda
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The above experiments concerning localization of various Fts proteins
in cells depleted of FtsEX were done in media without salt . Depletion
of FtsEX in LB with 1% NaCl caused the cells to form short filaments
( 10
µm), about 40% of which exhibited localization of GFP-FtsI (data not
shown) . Because we lack antibodies against FtsEX, we do not know
whether the better localization of GFP-FtsI was due to salt rescue of
localization (as expected) or less effective depletion of FtsEX .
We have shown that FtsE and FtsX localize to the septal ring, which
implies that FtsEX participates directly in the division process . In
a culture growing with a doubling time of about 30 min, about half of
the cells exhibited septal localization of FtsE and FtsX . These cells
were the longer (older) ones in the population and included cells
with deep constrictions . Apparently, FtsEX is not present at the
division site in newborn cells but gets recruited to that site during
the later stages of cell growth and remains there until division is
complete . This pattern of timed localization to the septal ring is
similar to what has been reported for many other Fts proteins (e.g.,
references 8, 12, and
38) . An additional line of evidence for direct participation
in cell division is that during depletion of FtsEX, cells stop
dividing before any change in growth rate (mass increase) is
apparent . Thus, filamentation does not appear to be a secondary
consequence of some metabolic defect or ion imbalance only tangentially
related to septum assembly . This is not a trivial observation,
as there are numerous examples of mutations that exert indirect
effects on cell division, such as mutations in nrdB, dnaK, secA,
and ffh (6, 26,
27, 35) .
Previous studies from several laboratories have produced a model
for the order of assembly of proteins into the septal ring in E .
coli (for a recent review, see reference 11) . A version
of this model, revised to incorporate our new findings, is presented
in Fig . 6 . We infer that FtsEX localizes after FtsZ,
FtsA, and ZipA and is important for recruitment of FtsK and all
subsequent division proteins . Although we only demonstrated this
directly for FtsK, FtsQ, and FtsI, previous work has established that
septal localization of FtsL, YgbQ, FtsW, FtsN, and AmiC (3)
requires prior localization of upstream proteins .
|
FIG . 6 . Model for recruitment of proteins to the septal ring . The first
event is polymerization of FtsZ into the Z-ring . FtsA, ZipA, and ZapA
bind directly to FtsZ and localize next or concomitantly with Z-ring
assembly . Once either FtsA or ZipA has joined the septal ring, the
remaining proteins localize in the order indicated . Whether any E .
coli proteins are dependent upon ZapA is not yet known.
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The ability of salt to rescue division in an FtsEX null mutant is
enigmatic if FtsEX is needed for proper assembly or stability of the
septal ring . Presumably, the downstream essential division proteins,
FtsK through FtsN, all of which are required for division even on
media containing salt, have some ability to localize in the absence
of FtsEX . Consistent with this, RG60 is sensitive to ß-lactams that
target FtsI (D . Weiss, unpublished data) and we observed localization
of FtsN, which is a late recruit to the division site (1),
when RG60 was grown under permissive conditions . It is tempting to
speculate that the ability of downstream proteins to localize
independently of FtsEX is why we observed some residual localization
of FtsK, FtsQ, and FtsI in filaments depleted of FtsEX in LB with no
salt, but we cannot exclude the less interesting possibility
that there is residual FtsEX in these filaments . Our depletion
strains express ftsEX from a multicopy plasmid, so we sought
to reduce the potential for leaky expression by placing a single copy
of PBAD-ftsEX on the chromosome . Unfortunately, this
configuration resulted in very poor complementation, presumably owing
to too little ftsEX expression in the presence of arabinose .
To explain the salt-remedial nature of ftsEX null mutants, we
propose that ionic conditions affect the folding, assembly,
and/or function of one or more of the downstream division proteins,
FtsK through FtsN . We further suggest that there is a synergistic
effect when combined with loss of FtsEX such that the septal ring
fails to assemble or function properly if both salt and FtsEX are
lacking, but salt can rescue the ring in the absence of FtsEX, albeit
poorly (recall that RG60 is filamentous even in the presence of
salt) .
An important question is whether FtsEX has any role in cell
division beyond serving as an assembly or stability factor . In
particular, one wonders whether FtsEX really is an ABC transporter
and, if so, what it transports . Sequence comparisons indicate that
FtsEX groups with importers rather than exporters (4) .
If FtsEX were an importer, it would be expected to function in
conjunction with a periplasmic binding protein, although none has
been associated with FtsEX as of yet . It has been speculated that
FtsEX imports an ion (13), in part because of the
salt-remedial nature of the defect in ftsEX mutants, but this
notion is difficult to reconcile with the lack of specificity with
respect to which salts rescue an ftsEX mutant (10) .
Moreover, FtsX does not appear to have any charged amino acids in its
transmembrane domains, so it is difficult to envision how FtsX would
accommodate an ion (R . Arends and D . Weiss, unpublished data) .
Finally, preliminary transcriptional profiling of an ftsEX
null mutant has revealed a number of genes whose expression is
altered, and none of these appears to be related to ion transport,
ion homeostasis, or osmotic regulation (R . Arends and D . Weiss,
unpublished data) .
Not all ABC systems that group with importers actually import, or
even transport, a substrate . Two interesting examples are the MacAB
system and the LolCDE system, both of which are phylogenetically
close to FtsEX (4) . MacAB is an exporter that confers
resistance to macrolides (21), while the LolCDE
system is not a transporter at all—it is involved in release of
lipoproteins from the cytoplasmic membrane (40) .
These observations make it worth considering functions for FtsEX that
are unrelated to import . It has been suggested that FtsEX might be
needed for insertion of a division protein into the cytoplasmic
membrane (4, 36) . An altogether
different possibility is that FtsX serves as a membrane anchor, while
FtsE uses ATP hydrolysis to promote constriction of the septal ring .
We thank Nienke Buddelmaijer, Joe Chen, Cynthia Hale, and Joe
Lutkenhaus for strains and plasmids and Elie Dassa for information on
ABC transporters, especially for calling our attention to MacAB and
LolCDE .
These studies were supported by grants from the National Institutes
of Health to D.S.W . (GM59893) and G.J.P . (GM50836) . The DNA
facility is supported by the Diabetes and Endocrinology Research
Center with National Institutes of Health grant DK25295 and by the
School of Medicine .
* Corresponding author . Mailing address: Department of
Microbiology, University of Iowa, Iowa City, IA 52242 . Phone: (319) 335-7785 .
Fax: (319) 335-9006 . E-mail:
david-weiss@uiowa.edu .
Present address: E . coli Genetic Stock Center, Department of
Molecular, Cellular, and Developmental Biology, Yale University, New
Haven, CT 06520-8193 .
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