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Scientific
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Free Online Full-text Article
Journal of Bacteriology, August 1998, p. 3873-3881, Vol. 180,
No. 15
Induced Levels of Heat Shock Proteins in a dnaK Mutant of
Lactococcus lactis
Birgit Koch,1 Mogens Kilstrup,2 Finn
K. Vogensen,1 and Karin Hammer2,*
Department of Dairy and Food Science, The Royal Veterinary and
Agricultural University, DK-1958 Frederiksberg C,1 and
Department of Microbiology, Technical University of Denmark,
DK-2800 Lyngby,2 Denmark
Received 24 November 1997/Accepted 28 May 1998
 |
ABSTRACT |
The bacterial heat shock response is characterized by the elevated expression
of a number of chaperone complexes and proteases, including the
DnaK-GrpE-DnaJ and the GroELS chaperone complexes. In order to
investigate the importance of the DnaK chaperone complex for growth
and heat shock response regulation in Lactococcus lactis, we
have constructed two dnaK mutants with C-terminal deletions in
dnaK. The minor deletion of 65 amino acids in the dnaK 2
mutant resulted in a slight temperature-sensitive phenotype. BK6,
containing the larger deletion of 174 amino acids (dnaK 1),
removing the major part of the inferred substrate binding site of the
DnaK protein, exhibited a pronounced temperature-sensitive phenotype
and showed altered regulation of the heat shock response. The
expression of the heat shock proteins was increased at the normal
growth temperature, measured as both protein synthesis rates and mRNA
levels, indicating that DnaK could be involved in the regulation of
the heat shock response in L. lactis. For Bacillus subtilis,
it has been found (A. Mogk, G. Homuth, C. Scholz, L. Kim, F. X.
Schmid, and W. Schumann, EMBO J. 16:4579-4590, 1997) that the
activity of the heat shock repressor HrcA is dependent on the
chaperone function of the GroELS complex and that a dnaK insertion
mutant has no effect on the expression of the heat shock proteins.
The present data from L. lactis suggest that the DnaK protein
could be involved in the maturation of the homologous HrcA protein
in this bacterium.
 |
INTRODUCTION |
DnaK is a bacterial member of the highly conserved, ubiquitous family of
70-kDa heat-shock-induced chaperone proteins (Hsp70 proteins). Genes
encoding DnaK have been sequenced from many species, but functional
studies have mainly been carried out with eucaryotes and with the
gram-negative bacterium Escherichia coli. More recently, such
studies have also been conducted with the gram-positive bacterium
Bacillus subtilis (34, 43). Studies
with E. coli have shown that DnaK functions as a chaperone in
collaboration with DnaJ and GrpE and that this chaperone complex
plays a significant role in the folding of nascent protein chains
during normal growth conditions and in the refolding of proteins
after thermal damage (5, 6,
8, 36, 44,
53; for reviews, see references 4
and 17). Furthermore, the DnaK-DnaJ-GrpE chaperone complex
participates in ATP-dependent proteolysis in the cell (for a review,
see reference 31). The eucaryotic DnaK homolog (Hsp70)
was shown to contain an amino-terminal ATP binding domain and a
substrate binding domain located immediately after the ATP binding
domain. A study of the binding properties of an internal Hsp70
polypeptide covering amino acids Ser-384 to Glu-543, located
immediately after the ATPase domain, indicated that the peptide
binding domain of Hsp70 is confined within this fragment (51).
The C-terminal fragment from amino acid 546 (9) was
found to be involved in neither ATP nor substrate binding, yet
several studies have indicated that the C terminus is needed for full
DnaK activity in eucaryotes (9, 14).
A comparison of the data from E. coli and B. subtilis suggests
essential differences between the functions of DnaK in these two
bacterial genera. In E. coli, dnaK expression is induced by
heat as well as by other stress factors, such as acid stress (19),
osmotic stress (33), and carbon starvation (23),
indicating that DnaK is involved in the general stress response of
E. coli. This finding has been confirmed by the phenotypes of
isolated dnaK mutants (5, 7,
33, 45). In B. subtilis, DnaK is
induced by heat but not by the addition of salt or by glucose
limitation (50), indicating a more limited role in stress
response than that found in E. coli. This finding is in
accordance with the phenotype displayed by a dnaK insertion
mutant (43).
The molecular bases for the regulation of the expression of dnaK and
the major heat shock genes are very different in E. coli and
B. subtilis. In E. coli, transcription of the dnaKJ operon
is stimulated by increased amounts of the heat shock sigma factor
32
at elevated temperatures. At normal temperatures,
32
is highly unstable and is degraded by the proteolytic activity of the
HflB (FtsH) protease in consort with the DnaK chaperone complex. DnaK
is thus a negative factor in the regulation of the heat shock
response in E. coli. Elevated growth temperatures prevent the
degradation of
32,
presumably by sequestering the DnaK chaperone complex with misfolded
proteins, thus inhibiting the degradation of
32.
In accordance with this model, mutations in dnaK, dnaJ, and
grpE result in increased expression of the heat shock genes, even
in the exponential growth phase, at normal temperatures (46,
48).
In B. subtilis, three classes of heat-induced genes have been found.
The dnaK operon, belonging to class I, has been shown to be
negatively regulated by a repressor. The repressor is encoded by the
hrcA gene, the first gene in the dnaK operon (42,
55). The hrcA gene is followed by grpE,
dnaK, dnaJ, and three other genes of unknown function (18,
21, 42). An hrcA deletion
mutation results in high levels of constitutive expression of
both the dnaK operon and the groESL operon, which is also of class
I. The groESL operon encodes another important chaperone complex.
Inactivation of dnaK in B. subtilis results in a slight
temperature-sensitive phenotype, and no increase in the expression of
other genes in the dnaK and the groELS operons has been
observed (34). Thus, apparently DnaK is not
involved in the regulation of the expression of general heat
shock-induced chaperones in B. subtilis. The operator regions
in front of the dnaK and groELS operons in B. subtilis
contain binding sites for the HrcA repressor. The operator sequences
are termed CIRCE, for controlling inverted repeats for chaperone
expression, are preserved in many bacterial genera, and are found
in the corresponding operons encoding the major heat shock-induced
chaperones (18, 38).
The gram-positive bacterium Lactococcus lactis has been found to
elicit a heat shock response similar to that of other bacteria (1,
28, 52), and the temporal induction
patterns suggest that the heat shock proteins fall in more than one
induction class. Apparently, DnaK, GroEL, and GroES fall in the same
class, consistent with the finding that both the hrcA (orf1)-grpE-dnaK
operon and the groESL operon of L. lactis contain
CIRCE-like elements in the promoter regions (13,
29). Also, the dnaJ gene has been shown to
contain the CIRCE element (49). Since dnaK mutants
of E. coli and B. subtilis have different phenotypes, we
wanted to analyze whether the heat shock response is altered in
dnaK mutants of L. lactis. For this purpose, two
C-terminal deletion mutants were constructed. The most severe
mutation removed a major part of the putative substrate binding site
of DnaK. Like the E. coli dnaK mutants, this mutant was found
to be temperature sensitive for growth and to contain elevated levels
of other heat shock proteins at 30°C. In contrast to the E. coli
mutants, the lactococcal mutant was able to develop thermotolerance,
although not as efficiently as the wild type. Possible implications
of these results are discussed.
In the second dnaK mutant, only the extreme C-terminal part of the
dnaK gene was deleted. This mutant differed slightly from the
wild type with respect to temperature sensitivity.
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MATERIALS AND
METHODS |
Strains and growth conditions. Table 1
lists the strains used in the present study and how they were constructed. The
lactococcal strains used are all derivatives of the plasmid-free
prophage-cured strain MG1363 (15). For the growth
of L. lactis strains, M17 medium (47) and chemically
defined SA medium (24) supplemented with 0.5% glucose
(GM17) and 1% glucose, respectively, were used. When required,
erythromycin was added at a final concentration of 2 µg/ml.
E. coli recombinant strains were grown in LB medium (40)
with the addition of ampicillin at 50 µg/ml.
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TABLE 1. Strains and plasmids used in
this study |
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For the determination of growth rates, the Bioscreen C (Labsystems) growth
monitoring system was used. The optical density at 600 nm (OD600)
was monitored every 15 min during the incubation period. The
microtiter plate was shaken before each measurement. Each well
contained 400 µl of growth medium and was inoculated with 4 µl of
overnight culture. In each experiment, five growth curves were
monitored. Growth rates were calculated by linear regression on the
linear part of an average growth curve (typically in the OD600
range of 0.3 to 0.8), and growth rates from independent experiments
were compared. When MG1363 was grown at 30°C, a series of five
experiments gave an average growth rate of 56.8 min with a standard
deviation of 3.5. The average growth rate for BK6 was 116.2 min with
a standard deviation of 1.2.
Analysis of thermotolerance. At an OD600 of
0.4, cells from exponentially growing cultures in GM17 were harvested and
resuspended in the same volume of GM17 with or without erythromycin
in glass tubes with a diameter of 1 cm. After 30 min of incubation at
30 or 40°C, the tubes were placed in a 53°C water bath. The number of
viable cells was determined as CFU on GM17 agar plates after
0, 15, 30, 45, and 60 min of incubation at 53°C.
DNA manipulations. The plasmids constructed in the
present study are listed in Table 1. The plasmids were
selected in E. coli XL1-Blue (Stratagene). For plasmid
construction, standard E. coli techniques were used (40).
Southern analysis was carried out as previously described (30)
with lactococcal chromosomal DNA prepared as previously described (25).
PCR amplification was carried out either with purified chromosomal DNA or
directly as colony PCR with a smear of a bacterial colony as the
substrate under standard conditions. For colony PCR with
Lactococcus colonies, the cells were treated with 0.1 M NaOH for
30 min at 97°C, vortexed with glass beads, and neutralized with HCl
and Tris (pH 7.5) prior to PCR.
Plasmid construction. Plasmid pBK100 was constructed by
inserting a ScaI-EcoRI fragment from pFI573, containing part of
dnaK, into the SmaI and EcoRI sites of the
pBluescriptSKII+ vector. Plasmid pBK102 was constructed by inserting
an HpaI-PstI fragment from pFI573 into the PstI
and HincII sites of the pBluescriptSKII+ vector. Plasmid
pBK104 was constructed by inserting an HaeII-EcoRI fragment from
pFI573 into the SmaI and EcoRI sites of the pBluescriptSKII+
vector. The HaeII site had been blunted with T4 DNA polymerase
before pFI573 was digested with EcoRI. Plasmids pBK101,
pBK103, and pBK105 were constructed by inserting a BamHI
fragment containing a functional erm gene from plasmid pUC7erm
(10) into the BamHI sites of plasmids
pBK100, pBK102, and pBK104, respectively.
Integration of plasmids into the L. lactis chromosome.
Competent L. lactis cells were transformed by electroporation essentially
as previously described (20). One microgram of
plasmid DNA was used in each transformation. Selection of erythromycin-resistant
transformants was performed on SR plates (20)
containing 2 µg of erythromycin per ml.
Confirmation of plasmid integration. To confirm the site
of integration, Southern analysis and PCR analysis were carried out. The
chromosomal DNA was digested with PstI; an internal EcoRI-PstI
fragment from dnaK was used as a probe. For MG1363, a single
fragment larger than 10 kb hybridized to the probe. The integrants
BK6, BK8, and BK11 all gave two fragments: one of the same size as
that found in MG1363 and the additional fragment having a mobility
corresponding to the theoretical size of 4,948, 5,276, or 5,074 bp,
respectively. PCR analysis was carried out either with chromosomal
DNA or directly as colony PCR. The following PCR primers were used:
MKP1 (5'-GCA ACT GCT GAA AGC TAC CTT-3'), which corresponds to a
sequence in dnaK before the site of integration; ERM1 (5'-CTA
TGA GTC GCT TTT GT-3') and ERM2 (5'-GTT TCC GCC ATT CTT TG-3'), which
both correspond to sequences in the erythromycin resistance cassette;
and PCK3719 (5'-GTC GCC ATC AAA TGT ATT-3'), which corresponds to a
sequence in the C-terminal part of dnaK. When primers MKP1 and
ERM1 were used, PCR products corresponding to the theoretical sizes
of 1,112 and 1,446 bp were produced from BK6 and BK11, respectively.
BK8 gave a PCR product corresponding to the theoretical size of
1,670 bp when primers MKP1 and ERM2 were used.
PCK3719 and MKP1 were used to confirm the absence of intact dnaK in
BK6 and BK11. In these experiments, BK8 and MG1363 were used as
controls and gave the expected 1,495-bp PCR product, while no PCR
product was obtained from BK6 and BK11.
Curing of L. lactis strains for the integrated
plasmids. Liquid GM17 was inoculated with integrants grown on a GM17 agar
plate containing erythromycin, and the culture was incubated
overnight. A 1% dilution of the overnight culture in GM17 was
subsequently incubated overnight. Cured strains were obtained from
this culture by screening for erythromycin-sensitive colonies.
Northern blotting. At an OD600 of 0.4, cells
from GM17 cultures were harvested either directly or after incubation for 15 min
at 43°C. RNA isolation and Northern blotting were carried out as
previously described (1). The following probes were
used for hybridization: a 1,704-bp (dnaK) DraI fragment
from pFI573 (13), a 576-bp (orf1) HindIII-BstEII
fragment from pFI573, a 1,392-bp (ftsH) HindIII fragment
from pLN32 (35), and a 726-bp (dnaJ) HindIII
fragment from pKS2 (1).
Western blotting. Total cell proteins were extracted
essentially as described previously (28) from cells harvested
at an OD600 of 0.4. Sodium dodecyl sulfate-polyacrylamide
gel electrophoresis (PAGE) was carried out on a 12% acrylamide gel
(29:1 acrylamide-bisacrylamide; Bio-Rad). The gel was transferred by
semidry electroblotting to an Immobilon-P membrane (Millipore) as
recommended by the supplier. Chemiluminescence detection of DnaK with
rabbit antibodies against DnaK from B. subtilis and
horseradish peroxidase-conjugated secondary antibodies was performed
with an Amersham ECL Western blotting analysis system.
2D gel analysis. Cells were grown in SA medium with
reduced amounts of unlabelled methionine. Labelling with [35S]methionine,
harvesting, extraction, and two-dimensional (2D) gel analysis were
performed as described previously (28).
 |
RESULTS |
Construction of dnaK mutants. The dnaK
operon from L. lactis, consisting of hrcA (orf1)-grpE-dnaK,
was cloned and sequenced by Eaton et al. (13). Downstream
of dnaK a putative transcriptional terminator structure was
identified; the structure was followed by an open reading frame (orf4)
with no similarity to known protein genes. Transcriptional analysis
previously showed that orf4 expression was not induced by heat
shock, in contrast to the expression of the dnaK operon, arguing
that transcription does not proceed past the terminator structure
(1). Therefore, since dnaK is the last gene of
the operon, it should be possible to delete different parts of the
dnaK gene in L. lactis by insertion mutagenesis without
creating polar effects on downstream genes in the operon. We used
this strategy to construct two different dnaK deletion mutants
of MG1363 by homologous recombination of nonreplicating plasmids
carrying internal fragments of the dnaK operon into the
chromosome.
Mutant BK6 was obtained by integration of plasmid pBK103, which contains an
873-bp HpaI-PstI internal fragment of dnaK. The
resulting C-terminal deletion (dnaK 1)
from the PstI site in dnaK is shown in Fig.
1B. Similarly, mutant BK11 (dnaK 2)
was obtained by integration of pBK105, which contains a 999-bp EcoRI-HaeII
fragment of dnaK. The resulting C-terminal deletion from the HaeII
site in dnaK is shown in Fig. 1B. In order to
obtain an erythromycin-resistant control strain for the BK6 and BK11
mutants, we integrated plasmid pBK101 into strain MG1363. Plasmid
pBK101 contains a 1,201-bp EcoRI-ScaI DNA fragment with
most of the dnaK gene, including the entire C-terminal
sequence. The integration event resulted in strain BK8, which carried
no gene disruptions. The correct integration of the plasmids was
verified by both PCR and Southern blotting as described in Materials
and Methods (data not shown).

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FIG. 1. Physical map of
the dnaK region in wild-type strain MG1363 and dnaK
mutants and Western blot analysis of mutant proteins. (A and B) Gray
boxes represent structural genes, and the gene designation is indicated.
(A) Physical map of the hrcA-grpE-dnaK operon in MG1363. (B)
Extent of dnaK sequences in the hrcA-grpE-dnaK operon in
mutant strains BK6 and BK11, shown by lines below a partial restriction
map of the dnaK gene. The mutants were constructed by homologous
recombination into the chromosome of various plasmids (see text for
details). (C) Functional domains recognized for the DnaK protein from
E. coli and the eucaryotic DnaK homologs Hsp70. (D) Western blot
analysis of mutant proteins with antibodies against DnaK from
B. subtilis. Proteins were extracted from exponentially growing
cells and separated by SDS-PAGE. Following transfer of the protein bands
to an Immobilon-P membrane, the DnaK protein was detected by
chemiluminescence with an Amersham ECL Western blotting analysis system
and antibodies against DnaK from B. subtilis. The approximate
sizes of the proteins are shown above the bands.
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In the dnaK 1
mutant BK6, 522 bp of the 3' end of the dnaK gene is deleted, specifying
174 amino acid residues, while the vector sequence adds 84 bp to the
reading frame before a stop codon is encountered. Thus, a truncated
DnaK protein of 49.4 kDa should be synthesized. In the dnaK 2
mutant BK11, 188 bp (65 amino acids) is deleted, and a truncated DnaK
protein of 58.8 kDa should be synthesized when the addition of five
vector-specified codons is taken into account. The full-length DnaK
protein has a calculated molecular mass of 65.0 kDa. We tested if it
was possible to identify the smaller DnaK proteins in the mutant
strains by means of Western blotting with antibodies raised against
the purified DnaK protein from B. subtilis (43).
As shown in Fig. 1D, it was possible to detect
mutant proteins with apparent sizes of 50 and 65 kDa (DnaK 1
and DnaK 2,
respectively). The wild-type DnaK protein had an apparent molecular
mass of 70 kDa, as determined previously (28).
Physiological characterization of mutants. Heat
sensitivity is encountered for all dnaK mutants of both E. coli
and B. subtilis. We therefore tested the heat sensitivity of
the lactococcal dnaK mutants by their growth on GM17 agar at
temperatures of 10 to 37°C. At 30°C, which is the standard growth
temperature for L. lactis, colonies with a 1-mm diameter were
formed after 1 day of incubation for both dnaK+ strains MG1363
and BK8 and the dnaK 2
mutant BK11, while the dnaK 1
mutant BK6 required 2 days at 30°C (Table 2). An equal
reduction in the growth rate of BK6, compared to the other strains,
was observed when the strains were grown in liquid GM17 at 30°C
(Table 2). When the growth rates of MG1363 and BK8 were
compared, a small negative effect of the addition of erythromycin was
seen. It was also evident that the dnaK 2
mutation in BK11 caused a growth rate slightly lower than that of BK8
containing the wild-type dnaK allele.
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TABLE 2. Growth of dnaK mutants at
various temperatures |
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At higher temperatures (Table 2), the growth of BK6
decreased with increasing temperature until growth stopped at 35°C. Concomitant
with the lower growth rates, the sizes of individual colonies
became much more variable and a smaller fraction of cells survived
the challenge. MG1363, BK8, and BK11 all grew as well at 33 and 35°C
as at 30°C, but at 37°C the dnaK+ strains showed approximately
half the growth rate found at 30°C while BK11 grew considerately more
slowly and with variable colony sizes.
The ability of the mutants to grow at low temperatures was tested by plating
at 10°C. All strains showed growth rates approximately 15 to 20% the
growth rate found at 30°C. It took MG1363, BK8, and BK11 6 days to
form 1-mm colonies at 10°C (Table 2) and 1 day to
do so at 30°C (Table 2), and it took BK6 10 to 11 days
to form colonies at 10°C and 2 days to do so at 30°C. Thus, neither
of the dnaK mutants showed increased cold sensitivity.
In order to confirm that the observed heat-sensitive phenotype of strain BK6
containing the dnaK 1
mutation was due to the deletion in dnaK, the strain was cured
of the inserted plasmid by growth in the absence of erythromycin and
screening for erythromycin-sensitive revertants as described in
Materials and Methods. These revertants, verified by PCR for the loss
of the plasmid, were able to plate at 35 and 37°C, like MG1363, and
showed the same growth rate as MG1363 at 30°C in GM17 (data not
shown). Thus, the temperature-sensitive phenotype of BK6 was indeed
due to the dnaK 1
mutation present in this strain.
The heat sensitivity of the dnaK mutants was further analyzed by
challenging exponentially growing cells at 30°C to the lethal
temperature of 53°C for 60 min and monitoring the fraction of
surviving cells by measuring CFU; the results are shown in Fig.
2A. The dnaK 1
mutant BK6 appeared to be more heat sensitive than the control
strain, while no heat-sensitive phenotype could be attributed to the
dnaK 2
mutant BK11.

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FIG. 2. Survival of
dnaK mutants at 53°C. Exponentially growing cultures in GM17 were
harvested and resuspended in fresh medium. (A) The washed cells were
incubated at 30°C for 30 min and then at 53°C for the indicated times
(minutes) (x axis). The fractions of surviving cells were
determined as CFU at 30°C on GM17 agar plates and are given relative to
those for untreated cultures (y axis). (B) The effects of
preincubating the cultures at 40°C were determined as described above,
except that cells were incubated for 30 min at 40°C instead of at 30°C
before subjection to 53°C. Symbols: diamonds, MG1363; triangles, BK8
(wild type); circles, BK11 (dnaK 2);
squares, BK6 (dnaK 1).
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|
Induction of thermotolerance has been found to be optimal when L. lactis
is preheated for 30 min at 40°C before incubation at 53°C (3).
These conditions were therefore used for testing the dnaK
mutants for thermotolerance (for further details of the performance
of the experiment, see Materials and Methods). The data shown in Fig.
2B indicate that the acquired thermotolerance of
the dnaK 1
mutant BK6 was significantly lower than that of the control strains
MG1363 and BK8. From the data in Fig. 2A, however,
it is evident that the mutant strain showed significantly better
survival after pretreatment at 40°C, so the acquisition of
thermotolerance by exposure to sublethal temperatures is possible,
even with a severely damaged DnaK protein. The induction of thermotolerance
in the dnaK 2
mutant BK11 was not significantly different from that in the control
strains.
It was previously shown that the heat shock-induced chaperones DnaK, GroEL,
and GroES are induced during salt stress (28),
suggesting a function of the chaperones under this condition.
Therefore, we wanted to determine whether a functional DnaK protein
is required for growth at high salt concentrations. The addition of
2.5 to 4% NaCl reduced the growth rate of MG1363 in GM17 (data not
shown). The growth rate was reduced to the same degree for both the
dnaK mutants BK11 and BK6 and the wild-type control strain
BK8. Thus, neither of the mutants showed altered salt sensitivity.
Induction of heat shock proteins by the dnaK 1
mutation. In E. coli, dnaK mutants show increased synthesis of
heat shock-regulated genes, compared to the wild-type strain, when grown
at the normal growth temperature (17, 46,
48). This was not found to be the case for a
dnaK mutant of B. subtilis (43). It was
therefore of considerable interest to test the rate of synthesis of
heat shock-regulated proteins in the dnaK 1
mutant of L. lactis. The synthesis of both mRNA and proteins
was monitored.
By Northern blotting, we determined the levels of heat shock mRNAs in the two
dnaK mutants. As shown in Table 3, hrcA-,
dnaK-, and dnaJ-specific mRNA levels were greatly elevated
in the dnaK 1
mutant BK6 (14-, 7.3-, and 2.3-fold for the three mRNA species,
respectively). In the dnaK 2
mutant BK11, the mRNA levels were also elevated; however, in this
strain they were only slightly elevated (3.1-, 3.2-, and 1.2-fold,
respectively). The HflB protease, encoded by the hflB gene (35),
was previously inferred to be involved in heat shock regulation in
L. lactis (12). The level of hflB-specific
mRNA was not, however, elevated in either BK6 or BK11 (Table
3).
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TABLE 3. Relative heat shock mRNA levelsa |
|
At the protein level, the dnaK 1
deletion resulted in the induction of heat shock proteins when the synthesis
rate was visualized by [35S]methionine incorporation (Fig.
3). When the pattern of proteins synthesized in BK8
(dnaK+-erm) during a 15-min period at 30°C (Fig.
3A) was compared to the pattern in BK6 grown and labelled under
identical conditions (Fig. 3E), most proteins were
labelled at the same relative intensities in the two strains,
indicating that their rates of synthesis were comparable. Some
proteins, however, were much more intensely labelled in BK6, showing
that they were induced in the dnaK mutant. Many of these
induced proteins (GroEL, GroES, Hsp84, Hsp85, and Hsp100) were
identical to the heat stress-induced proteins which were seen when
BK8 was subjected to 43°C for 5 min (Fig. 3B) or 30
min (Fig. 3C), followed by [35S]methionine
labelling of the newly synthesized proteins for 15 min at 43°C. The
presence of the dnaK 1
mutation resulted in a 10-fold increase in both GroEL and GroES
synthesis rates at 30°C (Fig. 3H). The DnaK protein
which was visible in BK8 at both 30 and 43°C was clearly absent in
BK6. However, the truncated DnaK 1
protein which was detected as a 50-kDa protein by Western blotting
in Fig. 1D most likely corresponded to the intensely
labelled spot which was located at the position indicated in Fig.
3E, F, and G and which had no counterpart in Fig.
3A, B, and C. This position had the coordinates
(7 and 80) in the L. lactis reference gel described elsewhere
(28) from which an apparent molecular mass of
49 kDa and an isoelectric point of 4.8 could be calculated. These
values are in agreement with the values predicted from the DNA
sequence of the dnaK 1
gene (49.4 kDa; pI, 4.78). The synthesis rate for this protein was
increased fivefold compared to the intensity of the DnaK spot in Fig.
3A (Fig. 3H).

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FIG. 3. Analysis of
protein synthesis rates in the dnaK 1
mutant BK6 by 2D PAGE. Bacterial cultures were grown exponentially at
30°C to an OD450 of 0.4, followed by a shift to 43°C. At the
indicated times after the temperature shift, [35S]methionine
was added and growth was continued for 15 min. Following extraction, the
labelled proteins were separated by 2D PAGE. The erythromycin-resistant
control strain BK8 (dnaK+-erm; A to C) and the dnaK
mutant BK6 (dnaK 1;
E to G) were analyzed. Growth temperatures and labelling periods were as
follows: 30°C,
15
to 0 min (A and E); 43°C, 5 to 20 min (B and F); and 43°C, 30 to 45 min
(C and G). (D and H) Relative protein synthesis rates for DnaK, GroEL,
and GroES. The amounts of radioactivity in the protein spots were
measured with a Packard Instant Imager. The values are given relative to
the total amount of radioactivity on the gels and are normalized to the
values from panel A, so that they represent the fold induction compared
to that in the dnaK+ strain grown at 30°C. (D) Values
from the gels shown in panels A to C. (H) Values from the gels shown in
panels E to G. The pictures were scanned at 300 dpi with a Scan Jet 4c/T
(Hewlett-Packard Co.) and DeskScan II version 2.3 software. The TIF file
was imported into Top Draw version 3.1 for the addition of text.
|
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When the temporal synthesis rates of GroEL and GroES after the 43°C heat
shock were compared for strains BK8 and BK6 (Fig. 3D
and H), it appeared that the maximal levels of expression were
approximately the same for the two strains, with GroEL reaching a
plateau at between 15 and 19% the total protein synthesis rate after
heat shock. The maximal levels of the GroES synthesis rate were about
4% the total synthesis rate for BK8 and 7% that for BK6. When the
elevated levels of expression at 30°C for the GroEL and GroES
proteins in BK6 were taken into account, the 35-fold induction seen
in the dnaK+ strain after transfer of the cells to 43°C (Fig.
3D) was reduced to 4- to 7-fold induction in the
dnaK 1
mutant (Fig. 3H). In the dnaK+
strain, the induction of DnaK exhibited a peak of synthesis at a
20-fold-elevated level between 5 and 20 min after subjection to 43°C
(Fig. 3D), similar to the heat shock response in wild-type
strain MG1363 (28). In contrast, the induction of the
truncated DnaK 1
protein showed a progressive increase with time (Fig. 3H),
resulting in a modest twofold-elevated level, but the end-point
synthesis level reached for either DnaK species was about 5% the
total synthesis rate. The values for the incorporation of radioactive
methionine in the two proteins could be directly compared as synthesis
rates, since only 1 of the 11 methionine residues present in DnaK
was missing from DnaK 1.
The possibility that the DnaK 1
protein is unstable cannot be ruled out and would have the effect of
underestimating its synthesis rate in Fig. 3H.
Whether the lack of a synthesis peak between 5 and 20 min after heat
shock could be the result of increased degradation during this period
is also not known.
Cell morphology and phage sensitivity of dnaK mutants.
For further comparison with the phenotypes of dnaK mutants of E. coli,
the lactococcal dnaK mutants were tested for filamentation and
propagation of phages. In E. coli, several dnaK mutants have
shown filamentous morphology due to defects in cell division (5,
32, 36). Therefore, the cell
morphology of MG1363, BK8, BK6, and BK11 was studied after growth at
30°C in GM17 with or without the addition of erythromycin. In
exponentially growing (4-h) and overnight (24-h) cultures, MG1363,
BK8, and BK11 typically appeared in short chains comprised of 4 to
10 cells in the chain, but in less than 1% of the chains, the chain
length was as high as 20 cells. However, in BK6, chains comprised of
more than 16 to 20 cells were dominant, and some chains had up to
40 to 60 cells (data not shown). The shape of the individual cells in
the chain was not changed.
A dnaK mutant was originally isolated from E. coli as a mutant
showing increased phage resistance. It was later shown that DnaK was
necessary for the replication of the E. coli phages
and P1 (54, 56) and for late
transcription of the E. coli phage Mu (41).
We therefore tested the dnaK 1
mutant strain BK6 for sensitivity to lactococcal phages. The
lactococcal phages have been divided into 11 species based on DNA-DNA
hybridization (22). We tested lactococcal phages
from the two most common groups of phages, namely, the small
isometric phages (three phages) and the prolate phages (one phage),
for their ability to form plaques on BK6. In the plaque assays, we
did not see any difference in plaquing ability or plaque morphology
between the mutant strain BK6 and the wild-type strain MG1363 for the
small isometric phages sk1 (37), p2 (26),
and
jj50
(27) or the prolate phage c2 (37).
 |
DISCUSSION |
In the present study, we constructed two dnaK deletion mutants of
L. lactis MG1363. The smallest deletion is found in the dnaK 2
mutant BK11, which has a deletion of 63 C-terminal amino acids. BK11
differs only slightly from the wild-type strain, but it has one
mutant phenotype; a slight temperature-sensitive phenotype was
observed when cells were plated at 37°C (Table 2). The chain
length of growing BK11 cells is not significantly different from
that of the wild-type cells, indicating that the level of excreted
lysozyme is unaltered. Thermotolerance develops as efficiently
in BK11 as in the wild-type strain, and the mutant was not found to
be more susceptible to thermal killing. This result indicates that
the function of DnaK is only slightly impaired by the dnaK 2
mutation. However, the existence of a phenotype for this mutant
indicates a function of the distal end of the DnaK protein. A similar
deletion mutant of E. coli showed no phenotype (8).
For the eucaryotic Hsp70 proteins, the amino acids from Ser-384 to Glu-543
are proposed to constitute the peptide binding domain (51).
Based on alignments, this region corresponds to amino acids 367 to
510 in the lactococcal DnaK sequence (data not shown). In the dnaK 1
mutant BK6, the region from amino acid 432 is deleted. We therefore
presume that interactions with substrates are severely affected in
this mutant, but we cannot exclude the possibility that some residual
DnaK activity exists, especially since the truncated DnaK peptide can
be detected, as shown by Western blotting (Fig. 1D).
However, in E. coli it has been shown that mutants lacking the
substrate region have the same phenotype as mutants lacking the
entire protein (36).
BK6 (dnaK 1)
is heat sensitive for growth, a phenotype which is also displayed by both
E. coli and B. subtilis dnaK null mutants. In the
E. coli dnaK52 null mutant, elevated temperatures are detrimental,
since cells incubated for 2 h at 42°C were found to be incapable
of colony formation at 30°C (36) and at 50°C the rate
of killing was found to be much higher for the E. coli dnaK
null mutant than for the wild type (11). The
increased thermosensitivity of the lactococcal dnaK 1
mutant (BK6) is in agreement with the data for the E. coli
mutant. BK6 is, however, capable of developing thermotolerance when
pretreated at 40°C, although not as efficiently as the wild-type
strain (compare BK6 to BK8 in Fig. 2). This acquired
thermotolerance was not observed in the E. coli dnaK52 null mutant,
which is deficient in the development of both heat- and starvation-induced
thermotolerance (11, 39).
At all temperatures tested (from 10 to 33°C), dnaK 1
BK6 showed reduced growth rates compared to the wild-type strain. This
result demonstrates that a functional DnaK protein is needed during
normal growth in L. lactis, as has been found for E. coli
mutants. In conclusion, the phenotype of the lactococcal dnaK 1
mutant resembles the severe effects in the E. coli mutants
more than the modest temperature-sensitive phenotype of the dnaK
mutant isolated from B. subtilis (43).
A major point of interest in this study was to test how a defective DnaK
protein would affect the expression of heat shock-induced chaperones.
In E. coli, the DnaK chaperone complex is known to be the
sensor of denatured proteins, and the availability of the complex
determines the rate of proteolysis of the heat shock sigma factor (16,
46). A dnaK mutant has impaired proteolysis of
the sigma factor and therefore contains increased levels of heat
shock proteins at the normal growth temperature and shows greatly
diminished shutoff of protein synthesis after heat shock. If the
availability of the DnaK chaperone complex could also function
as a sensor of denatured proteins in HrcA-regulated organisms, then
the HrcA heat shock repressor would be expected to be dependent upon
the DnaK complex for activity. During heat shock, when the complex is
sequestered by denatured proteins, the repressor might not mature
properly, leading to increased expression from CIRCE-regulated
promoters. Recently, however, it was reported that the GroELS
chaperone complex, and not the DnaK complex, is the sensor of
denatured proteins in B. subtilis (34). Also, in
Bradyrhizobium japonicum, a functional groEL gene product
seems to be necessary for the repression of the CIRCE-regulated
groELS4 operon at the lower growth temperature (2).
For B. subtilis the conclusion was partly based upon the fact
that a dnaK null mutation does not result in increased
expression of CIRCE-regulated genes, as it should if DnaK were needed
for repressor activity.
The orf1 gene in the dnaK operon of L. lactis has high
similarity to hrcA of B. subtilis. Since L. lactis has an
HrcA-like protein and CIRCE regulatory elements just like
B. subtilis, we expected that BK6 would not overexpress
chaperones, but much to our surprise the defect in the lactococcal
dnaK 1
mutant resulted in increased expression of all of the known
CIRCE-containing operons: dnaJ (Table 3),
groELS (Fig. 3), and the dnaK operon itself (Table
3 and Fig. 3). It therefore appears
that the dnaK 1
mutation does influence HrcA activity in L. lactis. Yet, the
activity of HrcA is not likely to be solely dependent upon the DnaK
chaperone complex, because BK6 can still acquire thermotolerance and
can still elicit a limited heat shock response. The induction of the
heat shock proteins in BK6 is due to the dnaK 1
mutation and is not an indirect effect of the slow growth rate of
this mutant, since reduced growth rates in purine- and
pyrimidine-requiring mutants do not induce heat shock proteins (27a).
It is also unlikely that the effect is due to the presence of the
integrated plasmid, e.g., by the production of an antisense RNA from
a plasmid promoter which could prevent hrcA, grpE, or
dnaK translation. We did not observe any such RNA species in a
Northern analysis in which a double-stranded DNA fragment was used as
probe (Table 3). Accordingly, no promoter is known
to be present in the plasmid immediately downstream of dnaK.
Concerning the role of the DnaK chaperone complex in HrcA stabilization, it
is noteworthy that the dnaK mutant of B. subtilis is
polar for the expression of the downstream genes. The downstream
genes are, however, constitutively expressed from a vegetative
promoter immediately upstream of dnaJ, resulting in the expression
of dnaJ at a reduced level (21,
43). Also, the dnaK 52
mutant of E. coli is polar and DnaJ is expressed
constitutively at a lower level from a similar internal promoter. For
the latter, it has been shown that the phenotype of the dnaK 52
mutant can be complemented by a wild-type dnaK gene provided
by a lambda phage and is thus not due to the reduced level of DnaJ (5).
The same may well be true for the dnaK mutant of B. subtilis.
It would, however, be important in light of the role of DnaK in
L. lactis to observe the phenotype of a nonpolar dnaK mutant of
B. subtilis; in addition, it would be most interesting to obtain
results from nonpolar dnaK mutants of other CIRCE-containing
organisms.
 |
ACKNOWLEDGMENTS |
The outstanding technical assistance of Tim Evison and Kristina Brandborg
Jensen is gratefully acknowledged. We gratefully acknowledge the gift
of the antibody against DnaK from B. subtilis from W. Schumann
as well as the dnaK plasmid, pFI573, from M. Gasson and the
ftsH plasmid, pLN32, from D. Nilsson.
This work was financed by MFF (Danish Dairy Board Research Foundation) and by
the FØTEK Program through the Center for Advanced Food Studies.
 |
FOOTNOTES |
* Corresponding author. Mailing address:
Department of Microbiology, Technical University of Denmark, DK-2800 Lyngby,
Denmark. Phone: 45 45 25 24 96. Fax: 45 45 88 26 60. E-mail:
kh@im.dtu.dk.
 |
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