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Journal of Bacteriology, June 2004, p . 3703-3711, Vol . 186,
No . 12
The
Decrease in FlaA Observed in a flaB Mutant of Borrelia burgdorferi
Occurs Posttranscriptionally
M . A . Motaleb, Melanie S . Sal, and Nyles W . Charon*
Department of Microbiology, Immunology, and Cell Biology, Robert C . Byrd
Health Sciences Center, West Virginia University, Morgantown, West Virginia
26506-9177
Received 8 December 2003/ Accepted 16 March 2004
The Lyme disease bacterium Borrelia burgdorferi is a motile
spirochete with a flat-wave morphology . The periplasmic flagella,
which are situated between the outer membrane sheath and cell
cylinder, are essential for both the cell's wavy shape and motility .
Here we focus on the structure and regulation of its periplasmic
flagella . Previous studies have suggested that the periplasmic
flagella consist of a polymer of the major filament protein FlaB and
a minor protein, FlaA . We used immunoprecipitation methodology to
present further evidence that FlaA is indeed a flagellar protein . In
addition, in contrast to FlaA of the spirochete Brachyspira
hyodysenteriae, B . burgdorferi FlaA did not impact the
overall helical shape of the periplasmic flagella . We have previously
shown that B . burgdorferi lacks the sigma factor-dependent
cascade control of motility gene transcription found in other
bacteria . To begin to understand motility gene regulation in B .
burgdorferi, we examined the effects of an insertion mutation in
flaB on the amounts of proteins encoded by motility genes . Of
several motility gene-encoded proteins examined, only the amount of
FlaA was decreased in the flaB mutant; it was 13% compared to
the wild-type amount . Real-time reverse transcriptase PCR analysis
indicated that this inhibition was not the result of a decrease in
flaA mRNA . In addition, protein stability analysis suggested that
FlaA was turned over in the flaB mutant . Our results indicate
that the lack of FlaB negatively influences the amount of FlaA found
in the cell and that this effect is at the level of either
translational control or protein turnover .
Borrelia burgdorferi is a motile spirochete that is the causative
agent of Lyme disease . The organelles for motility, the periplasmic
flagella (PFs), reside between the outer membrane sheath and
protoplasmic cell cylinder . Approximately 7 to 11 PFs are subterminally
attached at each end of the cell, and these filaments overlap
in the center of the cell (4, 27,
31) . Motility is likely to be an important
virulence factor for these spirochetes, as B . burgdorferi
penetrates into tissues where other organisms fail to invade (11,
34) . Moreover, motility has been postulated to be
essential for the life cycle of these spirochetes in both the tick
and the mammalian hosts (45, 55) .
We are beginning to understand the dynamics of B . burgdorferi
motility (see references 11, 42, and
45 for recent reviews) . Recent results indicate
that the PFs have both skeletal and motility functions (50,
61) . Cells of mutants that are targeted in flaB,
which encodes the major PF protein, are nonmotile and are rod shaped
instead of being a flat wave as are wild-type cells (50,
61) . During translational motility, backward moving
waves are generated that are responsible for cell displacement
(28) . These waves result from the rotation of the relatively
rigid left-handed helically shaped PFs closely juxtaposed to
and interacting with the flexible protoplasmic cell cylinder: the PFs
act as a gear generating waves along the cell cylinder from the
anterior to the posterior end of the cell (11,
27, 28, 42) . The bundles of
PFs rotate asymmetrically, with the anterior bundle rotating
counter-clockwise and the posterior one clockwise as viewed along the
length of the PFs from their distal ends towards their insertion
points on the cell (11, 28,
40) .
The PFs of B . burgdorferi have been analyzed in some detail .
These organelles have been shown to be left-handed, with a defined
helix pitch and diameter (12) . Their major constituent
is a polymer of FlaB, which is similar in sequence at the N- and
C-terminal domains to PFs of other spirochete species as well
as to flagellin of other bacteria (54, 63) .
Based on purification of PFs, FlaB was considered for several years
to be the only filament protein . However, DNA sequence analysis
indicated the presence of a flaA homolog (17,
20) . In other spirochete species, FlaA forms a
sheath around the FlaB core . In addition, FlaA markedly affects the
shape of the PFs in Brachyspira hyodysenteriae with respect to
helix pitch and helix diameter (9, 38,
41, 42, 54) .
We found that flaA was expressed in B . burgdorferi, and
when a gentler method of isolation was employed FlaA copurified with
the PFs (23) . However, in contrast to results seen with
other spirochete species (9, 38,
41, 42, 54,
59) considerably less FlaA relative to FlaB was
present in these purified PFs . Using immunoprecipitation, we provide
further evidence that FlaA is associated with FlaB . In addition, we
find that in contrast to other spirochetes there is considerably less
FlaA relative to FlaB not only in purified PFs but also within the
whole cell . Finally, we show that FlaA does not affect the PF shape
for B . burgdorferi as it does for B . hyodysenteriae .
Bacterial flagella are complex organelles that often comprise a
disproportionately large amount of protein in a motile cell . As a
result, bacteria have evolved elegant mechanisms of flagellar
assembly and control . Specifically, motile bacteria possess a cascade
system of transcriptional control (1-3,
14, 48, 49) .
For example, in Escherichia coli and Salmonella enterica serovar
Typhimurium the cell senses specific environmental signals to
commence expression of class 1 genes flhC and flhD . FlhC and
FlhD then promote the initiation of transcription of class 2
motility genes (2, 14) . These genes
include, among others, those that encode the proteins that comprise
the basal body apparatus . Two of the class 2 genes, fliA and
flgM, play critical roles in regulating class 3 gene
transcription . Specifically, fliA encodes sigma28
that promotes transcription of class 3 genes, including the flagellar
filament gene fliC . flgM encodes an anti-sigma28
factor, FlgM (2, 14), which is excreted
into the medium when the flagellar hook-basal body is complete . FlgM
insures that the class 3 genes are not transcribed until the
initial flagellar structure is intact, thus providing the cell with a
mechanism to sense the state of flagellar synthesis and adjust its
transcription accordingly (2, 14) .
The regulation of motility gene expression in B . burgdorferi
is unique, as it lacks the cascade control of flagellar gene
transcription found in other bacteria . The results of several studies
indicate that gene transcription of the numerous motility operons is
initiated by the housekeeping transcription factor sigma70
(11, 17, 20,
22, 24, 25,
42) . Furthermore, no fliA homolog has been
identified in its genome (17, 42) . To
begin to understand how the motility genes are regulated in B .
burgdorferi, we are examining the effects of specific PF
mutations on the synthesis of several motility and chemotaxis gene
products . In this communication, we report our results determined
with a previously described insertion mutant in flaB (50,
61) .
Bacterial strains and growth conditions. High-passage B .
burgdorferi sensu stricto strain B31A, the flaB mutant
MC-1, and the complemented flaB mutant MS17 have been
previously described (8, 50,
61) . Briefly, strain MC-1 has a flgB promoter-kanamycin
cassette inserted into flaB of B . burgdorferi . This
mutant is nonmotile and fails to synthesize PFs (50) . Strain
MS17 is a derivative of MC-1 containing a wild-type copy of
flaB in the plasmid pED3 . pED3 complements the flaB mutation
in cis, i.e., only when the plasmid is integrated into the
chromosome by a Campbell-type recombination event (61) .
Cells were grown in Barbour-Stoenner-Kelly II (BSK-II) broth or on
plates at 32 to 34°C as previously described (50).
S . enterica serovar Typhimurium strain SJW1103 is wild type
for chemotaxis and flagellation, and strain SJW1368
(cheW-flhD)
is a master operon mutant which is aflagellate (18) .
These strains were the kind gift of the late R . Macnab, Yale
University .
Gel electrophoresis and Western blot analysis. Sodium
dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and
Western blotting with an enhanced chemiluminescent detection method
(ECL; Amersham Pharmacia) were carried out as previously reported (23) .
Equal amounts (except as noted) of cellular protein in lysates, as
determined by a Bio-Rad protein assay kit, were applied to each lane .
Several monoclonal and polyclonal antibodies kindly provided by other
investigators included the following: monoclonal anti-FlaA (B .
Johnson, Centers for Disease Control and Prevention, Atlanta, Ga.),
monoclonal anti-OspA and DnaK (J . Benach, State University of New
York, Stony Brook), monoclonal anti-FlaB (H9724; A . Barbour,
University of California, Irvine), rabbit anti-MotB (J . Carroll,
Rocky Mountain Laboratories, Hamilton, Mt.), rabbit polyclonal
anti-FlaA of Treponema pallidum (S . Norris, University of
Texas, Houston), rabbit anti-CheA of E . coli (P . Matsumura,
University of Illinois, Chicago), and rabbit anti-FliM of E . coli
(D . Blair, University of Utah, Salt Lake City) . Rabbit anti-CheY2 and
anti-FlgE will be described elsewhere (M . Motaleb, M . Sal, and N .
Charon, manuscript in preparation) . Specific monoclonal or polyclonal
reactivity to B . burgdorferi DnaK, FlaA, FlaB, FliI, MotB,
CheA1, CheA2, and CheY3 has been previously reported (5,
10, 15, 25,
26, 40, 50,
53) . Insertion mutations in flaA, flaB,
flgE, motB, cheA1, cheA2, cheY2, and
cheY3 verified antibody specificity by Western blotting (40,
50; M . Sal, M . A . Motaleb, and N . W . Charon, Abstr .
Bacterial Locomotion and Signal Transduction Meeting VII, Cuernavaca,
Mexico, p . 87, 2003; M . Motaleb, M . Sal, and N . Charon, unpublished
data) . Anti-FliM reactivity was verified using S . enterica serovar
Typhimurium strains SJW1103 and SJW1368 .
Quantitative immunoblot assays. To quantify FlaA and FlaB in
cell lysates, PFs were purified using the Triton X-100 method as
previously described (23) . PF proteins were
separated on SDS-PAGE gels, and the bands corresponding to FlaA and
FlaB were cut from the gels which were then electroeluted using
ExElutor (Labnet International Inc., Woodbridge, N.J.) . FlaA and FlaB
were concentrated by centrifugation in Amicon Ultra concentrators
(Millipore, Bedford, Mass.) . Protein concentrations were determined
using a Bio-Rad protein assay kit as well as SDS-PAGE gels stained
with Coomassie brilliant blue R-250 with bovine serum albumin as a
standard . Different amounts of purified FlaA, FlaB, and cell lysates
were probed with monoclonal anti-FlaA and anti-FlaB by the use of
Western blotting . Signals were quantified by FluorChem spot
densitometry (Alpha Innotech, San Leandro, Calif.) .
Immunoprecipitation and PF morphology. Immunoprecipitation
was carried out as previously described (43) .
Approximately 5 x 109 B .
burgdorferi cells were washed twice with 150 mM
phosphate-buffered saline (pH 7.5)-5 mM MgCl2 and were
lysed by incubation at 37°C for 1 h in TSEA buffer (50 mM Tris-HCl,
150 mM NaCl, 5 mM EDTA, 0.05% sodium azide, pH 7.5) containing 1%
Nonidet P-40 and 50 µg of phenylmethylsulfonyl fluoride/ml . The
lysate was centrifuged (1,600 x g for
30 min, 25°C), and the pellet was resuspended in phosphate-buffered
saline and sonicated for 1 min intermittently for 20 min in ice
followed by centrifugation (14,800 x g
for 30 min, 25°C) . Approximately 200 µl of the supernatant fluid was
incubated with 15 µl of the monoclonal anti-FlaB for 1 h at 25°C
in the presence of 1% bovine serum albumin . Controls consisted
of anti-FlaB incubated with no cell sonicate and the cell sonicate
incubated with no antibody . After incubation, approximately 50 µl of
protein A (Pansorbin [Staphylococcus aureus Cowan 1];
Calbiochem Behring, La Jolla, Calif.) was added to each sample and
further incubated for 1 h at 25°C . The immunoprecipitates and
controls were centrifuged at 1,600 x g
at 25°C and washed three times with 1 ml of TSEA buffer containing
0.05% Tween-20 . The final pellets were suspended in 60 µl of
electrophoresis sample buffer, boiled for 5 min, and briefly
centrifuged as before . For Western blotting, 10 µl of the supernatant
fluids was applied to each lane of a SDS-PAGE gel . The left- or
right-hand orientation, helical pitch, and helical diameter of the
purified PFs were determined using dark-field microscopy as
previously described (12, 23,
41) . PFs containing both FlaA and FlaB were
purified using the Triton X-100 method as previously described (23) .
PFs containing FlaB and no FlaA were purified with Sarkosyl as
previously reported (12, 23) .
Real-time quantitative RT-PCR and RNase protection assays.
Total cellular RNA was extracted using an RNeasy kit from QIAGEN and
then digested with Turbo DNase I (Ambion) at 37°C for 2 h . Equal
amounts of total RNA (approximately 0.3 µg) were used to generate
cDNA according to the protocol of the manufacturer (Promega) . To
ensure that the RNA preparations were free from genomic DNA, reverse
transcription was performed with or without reverse transcriptase .
Quantitative PCR was carried out in duplicate on cDNA with SYBR Green
master mix (QIAGEN) and a LightCycler (Roche Biochemicals) . A
standard curve was generated using 10-fold serial dilutions (1.0 pg
to 0.1 fg) from the flaA reverse transcriptase PCR (RT-PCR)
product . 16S rRNA was used as an internal control . PCR primers for
flaA (BB0668; GenBank accession no.
U62900) were the following: forward primer,
5'-CACTAGTTCTTTTTGCTCAA-3'; reverse primer, 5'-ACTGCAGTACCTTTTTGACTC-3' .
For 16S rRNA (GenBank accession no.
L40596), the primers were the following: forward primer,
5'-GTGGCGAACGGGTGAGTAAC-3'; reverse primer,
5'-CCGTCAGCTTTCGCCATTGC-3' . Results are expressed with respect to the
threshold cycle at which the measured fluorescence increased above
background (57) .
RNase protection assays were carried out using a Hybspeed RPA kit
from Ambion according to standard procedures (23) . Briefly,
primers for the B . burgdorferi flaA and 16S rRNA were used to
amplify specific regions by PCR . The amplified regions (305-bp
flaA and 296-bp 16S rRNA) were cloned into pGEM-T Easy vector
(Promega), and the resultant plasmids were linearized with SpeI (flaA)
or NcoI (16S rRNA) . Antisense riboprobe was synthesized with [ -32P]UTP
(Amersham Pharmacia) and a transcription kit (Ambion) and purified
using a 5% polyacrylamide-8 M urea gel . Hybridization and digestion
were done as described previously (23) . Transcript
levels were quantified using a Molecular Dynamics PhosphorImager .
Protein turnover. Techniques previously employed for other
bacteria (33) were used to determine the stability
of FlaA in growing cells . Wild-type and MC-1 strains were grown in
BSK-II medium at 33°C until cells reached a density of 5
x 108 cells per ml . Cells (2 ml)
were added to 40 ml of BSK-II medium containing spectinomycin
(final concentration, 100 µg/ml) and incubated at 33°C . Samples were
removed and processed for Western blotting at indicated time points .
Association of FlaA with FlaB. Ge et al . previously found that
FlaA and FlaB copurified when the Triton X-100 procedure was used for
PF isolation (23) . To confirm that these two
proteins were actually associated with one another, FlaB was
immunoprecipitated from cell lysates of B . burgdorferi and the
resulting immunoprecipitate was probed with anti-FlaB (Fig.
1, left panel) and anti-FlaA (Fig . 1, right
panel) in Western blotting . We found that FlaA coprecipitated
with FlaB (Fig . 1, right panel), while no coprecipitation
occurred with another abundant B . burgdorferi protein, OspA
(data not shown) . These results suggest that there is a specific
association of FlaA with FlaB in situ .
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FIG . 1 . Immunoprecipitation of FlaA with monoclonal H9724 anti-FlaB .
Wild-type-cell sonicates were immunoprecipitated with FlaB antibody (Ab)
and then probed with monoclonal antibody to FlaB (left panel) and FlaA
(right panel) by Western blotting . The upper and lower bands of heavy
and light chains of the primary antibody are identified . As controls
without FlaB antibody, neither FlaB nor FlaA was precipitated (middle
lanes).
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FlaA is a minor PF protein. SDS-PAGE of purified PFs was
previously used to estimate the relative amounts of FlaA and FlaB in
B . burgdorferi . In these studies, FlaA was found to be a minor
component (23) . These results are in contrast to
those obtained with other spirochete species, for which the amount of
FlaA is approximately equal to that of FlaB (9,
41, 53, 54,
59) . One concern is that perhaps much of the B .
burgdorferi FlaA was lost during the purification of PFs .
Accordingly, we determined the amounts of both FlaA and FlaB in total
cell lysates by the use of quantitative immunoblotting . Western blot
results indicated that FlaA contributed less than 0.5% to the total
protein of the cell (Fig . 2a) . In contrast, FlaB
was found to contribute 10 to 14% of the total cell protein (Fig.
2b) . This relatively large amount of FlaB is in agreement
with the results seen with other multiflagellated bacteria . In
S . enterica serovar Typhimurium, which has approximately eight
flagella per cell, the filament protein FliC contributes 8% of the
total cell protein (51) . B . hyodysenteriae has
approximately 10 to 13 PFs per bundle, and these PFs have been
estimated to contribute 5 to 10% of the total protein (39) .
Our results are consistent with the PFs being a major constituent of
B . burgdorferi and with these organisms accumulating
considerably less FlaA than FlaB .
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FIG . 2 . Quantitative Western blot analysis of periplasmic flagellar
protein levels in wild-type B . burgdorferi . (a and b) Different
amounts of gel-purified FlaA, FlaB, and cell lysates were separated and
probed with monoclonal anti-FlaA (a) and anti-FlaB (b) antibodies . The
amounts of FlaA and FlaB in the cell lysates were calculated from the
standard curves obtained from purified FlaA (a) and FlaB (b),
respectively . Inserts illustrate Western blot reactivity at a specific
amount of protein lysate . (c) Dark-field micrograph of a PF bundle
containing FlaA and FlaB, which were isolated using the Triton X-100
method (23).
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Influence of FlaA on PF structure. FlaA has been shown to
affect the PF structure of B . hyodysenteriae . Specifically,
PFs from mutants that lack FlaA have a helix pitch and helix diameter
markedly different from those of the wild type (41).
B . burgdorferi PFs were previously shown to be left-handed and
have a helix pitch of 1.48 µm ± 0.03 µm and helix diameter of 0.28 µm
± 0.03 µm . These measurements were made with PFs isolated using
Sarkosyl; such PFs lack FlaA (12) . To examine
whether FlaA influenced the PF shape of B . burgdorferi, we
isolated PFs containing both FlaA and FlaB by the use of the gentler
technique that replaces Sarkosyl with Triton X-100 (23) .
We found that PFs with both FlaA and FlaB were identical in shape to
those isolated without FlaA (left-handed; helix pitch, 1.5 µm ± 0.028
µm; helix diameter, 0.33 µm ± 0.027 µm) (Fig . 2c) .
The results indicate that in contrast to the results seen with B .
hyodysenteriae, FlaA does not influence the helical shape of the
PFs .
Influence of flaB::kan on the synthesis of select gene
products in motility operons. Previous results indicated that B .
burgdorferi lacks the typical cascade control of flagellar gene
regulation seen in other bacteria (11,
17, 20, 22,
24, 25, 42) . To begin
to understand how motility genes are regulated in B . burgdorferi,
we examined the effects of a flaB::kan mutation (mutant
MC-1) on the synthesis of other flagella and chemotaxis proteins . The
flagellar filament gene flaB maps far to the left on the
linear B . burgdorferi chromosome (17) and
is transcribed as a monocistronic mRNA (19, 60) .
We first examined protein synthesis with respect to select genes
in the large 21-kb flgB operon that encodes most of the hook,
basal body, and motility genes . This operon maps approximately
180 kb away from flaB (17) . Those genes chosen for
analysis were fliI, flgE, fliM, and motB;
each maps several open reading frames (ORFs) away from the others .
FliI in other bacteria is associated with both basal body protein and
flagellin export . FlgE is the flagellar hook structural protein which
serves as a universal joint between the flagellar basal body and the
filament (6) . FliM is part of the rotary apparatus
of the motor, and MotB is the stator involved in energy transduction
to the motor (6) . Insertion mutations in flgE
and motB led to the expected nonmotile phenotypes (Sal et al.,
Abstr . Bacterial Locomotion and Signal Transduction Meeting VII;
Motaleb, Sal, and Charon, unpublished), indicating that these genes
function in motility as predicted from their sequence . Western blot
analysis indicated that although the synthesis of FlaB was inhibited
in MC-1 as reported previously (50), no decrease
in the amount of protein is evident with respect to FlgE, FliI, FliM,
and MotB (Fig . 3) . These results suggest that
flaB::kan did not alter the synthesis of the encoded
proteins for the select motility genes assayed in this operon .
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FIG . 3 . Effect of flaB::kan on other motility and
chemotaxis proteins . Equal amounts (10 µg) of cell lysates from
wild-type and the flaB::kan mutant MC-1 strains were
probed by Western blotting with antibodies specific for the indicated
proteins . DnaK was used as an internal control as shown in Fig.
4b . The apparent sizes (in kilodaltons) of the
proteins are as follows: FlaB, 41; FliI, 48; FlgE, 40; FliM, 37; MotB,
24; CheA1, 80; CheY2, 12.
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We examined the effect of the flaB mutation on a putative chemotaxis
operon, which is approximately 400 kb away from flaB . This operon
consists of cheW2, orf566, cheA1, cheB2,
orf569, and cheY2 . Preliminary results indicate that
mutations in cheW2, orf569, and cheY2 negatively
impact chemotaxis (C . Li, M . Motaleb, and N . Charon, unpublished
data) . However, although Western blot analysis indicated that CheA1
was produced it was found not to be essential for chemotaxis (40) .
We tested whether flaB::kan affected the expression of
CheA1 and CheY2 . Western blot analysis indicated that the levels of
CheA1 and CheY2 in the MC-1 mutant were equal to those in the wild
type (Fig . 3) . These results indicate that flaB::kan
did not influence the amounts of CheA1 and CheY2 .
Protein synthesis of select genes in the flaA operon.
Another relatively large operon consists of flaA-cheA2-cheW3-cheX-cheY3
(20, 22, 23) . It
maps approximately 550 kb away from flaB . Targeted mutations
in cheA2, cheX, and cheY3 markedly affect chemotaxis
in B . burgdorferi (40; M . A . Motaleb and N . W .
Charon, unpublished data) . We tested the effect of the flaB::kan
mutation on the synthesis of FlaA, CheA2, and CheY3 . Western blot
analysis indicated that both CheA2 and CheY3 in strain MC-1 were
synthesized at levels equivalent to that for the wild type (Fig.
4a) . However, the results obtained with Western
blots probed with either a heterologous polyclonal FlaA antiserum
(Fig . 4a) or a monoclonal antibody directed to
B . burgdorferi FlaA (Fig . 4b) indicated that
the level of FlaA in MC-1 was markedly decreased . When the monoclonal
antibody was used, FlaA often formed a doublet, with the major band
migrating to approximately 38 kDa and the minor band at 37 kDa . With
the monoclonal antibody, approximately 15 µg of protein lysate loaded
in the gel lane was necessary for detection of FlaA in strain MC-1 .
No FlaA in strain MC-1 was seen with the polyclonal antiserum under
the same conditions . Quantitative immunoblotting analysis indicated
that the amount of FlaA in MC-1 was approximately 13% of the amount
seen with the wild-type strain (Fig . 4b) . To
further test whether this inhibition of FlaA accumulation was
specifically related to flaB::kan, we tested the
flaB::kan-complemented strain MS17 . This strain is wavy
and motile and has PFs (61) . We found that the
level of FlaA in strain MS17 was equivalent to that seen with the
wild-type strain (Fig . 4b) . These results suggest that
the flaB::kan mutation specifically decreases FlaA
accumulation in B . burgdorferi .
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FIG . 4 . Effect of flaB::kan on proteins encoded by genes
in the flaA operon . (a) Western blot analysis of wild-type and
MC-1 strains . FlaA was probed with polyclonal T . pallidum FlaA
antiserum (Tp) . (b) Western blot probed with monoclonal antibodies
anti-FlaA, FlaB, and DnaK to the wild-type strain, strain MC-1, and the
complemented strain MS-17 . DnaK was used as an internal control . For
FlaA, FlaB, and DnaK detection in the wild-type and MS-17 strains,
approximately 10 µg of cell lysate was loaded into each lane . For strain
MC-1, 20 µg of cell lysate was loaded into the lane for FlaA and 10 µg
was loaded for DnaK . The apparent sizes (in kilodaltons) of the proteins
are as follows: CheA2, 98; CheY3, 10; FlaA, 38; DnaK, 72.
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Transcription of flaA in strain MC-1. One mechanism that
could explain the reduced FlaA protein levels in the flaB::kan
mutant is inhibition of flaA transcription . To test for this
possibility, mRNA levels were measured for the wild-type strain and
flaB::kan mutant by both quantitative RT-PCR and RNase
protection assays . 16S rRNA was used as a control in both assays .
Quantitative RT-PCR results indicated that the level of flaA
transcript in MC-1 was similar to or slightly greater than that seen
with the wild-type strain (Fig . 5) . Furthermore,
RNase protection assay results yielded PhosphorImager units for the
wild-type and MC-1 strains of 2,150 and 2,020 for flaA and
1,175 and 1,015 for 16S rRNA, respectively . These results taken
together reveal that the flaB::kan mutation did not negatively
influence flaA mRNA synthesis . The results are also consistent
with the lack of inhibition of downstream gene expression in
this operon in strain MC-1, as exemplified by the results seen with
CheA2 and CheY3 (Fig . 4a) .
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FIG . 5 . Detection and quantification of relative amounts of flaA
transcript in the wild-type (WT) and MC-1 strains using real-time
RT-PCR . Average threshold cycle (Ct) values were calculated from
duplicate samples in each experiment.
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Posttranscriptional control of FlaA. Two explanations are
evident with respect to the lack of FlaA protein detected in MC-1 .
One hypothesis states that FlaA synthesis is controlled at the
translational level . For example, perhaps FlaB is an activator for
translation of FlaA . Alternatively, perhaps FlaA is rapidly degraded
without FlaB . To test for possible turnover, spectinomycin was added
to growing cells and the stability of FlaA was monitored by Western
blot analysis (Fig . 6) . Spectinomycin at 100 µg/ml
was found to rapidly inhibit protein synthesis and growth, and the
cells remained intact for several hours . DnaK was used as a control,
as transcription of this protein has been previously shown to be
relatively constant under different growth conditions (56) .
We found that the level of DnaK in spectinomycin-treated cells was
stable in both the wild-type and MC-1 strains for as long as 12 h
(Fig . 6) . Similar results were found with respect
to FlaA in the wild-type strain . However, the level of FlaA in strain
MC-1 showed an approximately 50% decrease by 2 h . By 12 h, there
still was a trace of FlaA present . These results indicate that FlaA
is degraded in the MC-1 strain, with a half-life of approximately 2
h .
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FIG . 6 . Degradation of FlaA . Stability of FlaA was determined by adding
spectinomycin (100 µg/ml of culture) to growing B . burgdorferi
cells . At different time points, samples were subjected to Western
blotting with monoclonal anti-FlaA . DnaK was used as an internal
control . Approximately 5 µg of lysate was loaded into each lane for the
wild-type strain . For strain MC-1, approximately 20 µg was loaded for
detection of FlaA and 5 µg was loaded for detection of DnaK.
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Motility is energetically costly to B . burgdorferi . We found
that the contribution of the major PF filament protein FlaB to the
organism is substantial; it constitutes between 10 and 14% of the
cellular protein total . Furthermore, at least 5% of the genome is
dedicated to motility and chemotaxis (17) .
Specifically, approximately 42 ORFs homologous to motility genes of
other bacteria have been identified; this estimate includes the
multiple homologs of certain chemotaxis (cheY, cheA, cheW,
cheR, and cheB) and flagellar genes (fliG) . Targeted
mutagenesis of many of these genes indicates that they function in
motility and chemotaxis (40; M . Motaleb, C . Li, M .
Sal, R . Bakker, and N . Charon, unpublished data) . In addition, eight
more ORFs of undetermined function map within the major motility
operons . Because of their location, these ORFs are also likely to be
involved in motility and chemotaxis . Thus, we estimate that
approximately 50 of the total of 1,000 ORFs encoded by the B .
burgdorferi chromosome are involved in these functions .
We found that there was considerably less FlaA than FlaB in B .
burgdorferi, with FlaA contributing less than 0.5% of the total
cellular protein . The function of FlaA in spirochete motility is
presently unknown . In several spirochete species, FlaA forms a
protein sheath around the FlaB core (9, 11,
38, 41) . Null mutants in
flaA in B . hyodysenteriae have been characterized (41,
58) . These mutants lack the flagellar protein sheath and
have an altered PF helical shape, but they still retain motility
(41) . Microscopic observations and swarm plate assays
indicate that these flaA mutants of B . hyodysenteriae
are less motile than the wild type (41,
58) . In B . burgdorferi, no sheath is
evident in electron microscopic observation (Motaleb and Charon,
unpublished) . As shown by immunoprecipitation, FlaA associates with
FlaB, confirming that it is a flagellar protein . In contrast to the
results seen with B . hyodysenteriae (41), FlaA did not
influence the helical shape of the PFs from B . burgdorferi .
Preliminary results with a flaA::kan mutant yielded a PF
shape identical to that seen with the wild type (Motaleb and Charon,
unpublished) . Future experiments will focus on localizing FlaA
on the PF filament by immunogold technology .
We found by Western blot analysis that FlaA in B . burgdorferi
often migrated as a doublet (Fig . 4b) . These doublets
were most commonly observed when large amounts of protein were loaded
in the gels . The major protein was approximately 38 kDa in size,
which is consistent with our published results obtained with
strain 212 and the results of others (23, 26) .
The minor protein of approximately 37 kDa was often not seen (Fig.
1, 2, and 6),
and we could only detect it by Western blotting . The minor 37-kDa
band has not been previously reported (23, 26) .
Several possible explanations could account for the lack of
previously detection of the minor FlaA protein . One possibility is
differences with anti-FlaA reagents . In our previous studies, we used
a heterologous polyclonal antibody to T . pallidum FlaA (23) .
As shown in Fig . 4, the minor protein was not
detected using this antiserum; it was only detected using the
monoclonal anti-FlaA of B . burgdorferi . Furthermore, when we
used the monoclonal antibody to test strain 212, the Western blot
pattern was identical to that seen with strain B31 (Motaleb and
Charon, unpublished) . Thus, the 37-kDa band is not strain specific .
In addition, this minor protein was not detected by Gilmore et al.,
who first obtained and analyzed the FlaA monoclonal antibody (26) .
One possible explanation is that these investigators used the
less-sensitive colorimetric assay for immunostaining . Because the
37-kDa protein was present in relatively small amounts, it may have
gone undetected (26) . Motaleb and Charon found
that prolonged incubation of cell lysates at 23 or 37°C did not
change the ratio of the two FlaA bands (Motaleb and Charon,
unpublished); thus, it is unlikely that the 37-kDa protein is the
result of protein degradation . Both proteins are likely to be encoded
by flaA, as a flaA::kan mutant lacks both
proteins but still synthesizes FlaB at a level similar to that seen
with the wild-type strain (Motaleb and Charon, unpublished) . Our
preliminary experiments performed to characterize the minor band by
mass spectroscopy have been unsuccessful . It will be interesting in
future experiments to sort out the relationship of the two proteins .
Several lines of evidence suggest that the N terminus of the FlaA is
cleaved by signal peptidase I (20,
21, 23, 26) and that this protein is
also glycosylated (23) . Perhaps the
lower-molecular-weight form is unglycosylated FlaA . Alternatively,
others have shown that the carboxy-terminal end of certain outer
membrane proteins of B . burgdorferi is cleaved (52);
thus, the low-molecular-weight protein could be the result of
specific protease digestion .
We examined the effects of an insertion mutation in flaB on
the synthesis of other motility proteins . Because B . burgdorferi
lacks sigma-dependent cascade control of flagellar gene regulation
(11, 17, 20,
22, 24, 25,
42), we could not predict how a flaB
mutation would influence the expression of other motility genes .
Western blot analysis indicates that eight of nine putative
chemotaxis and motility proteins tested had unaltered levels of
accumulation compared to the wild-type results . Of those tested, the
only gene product found to be significantly reduced was FlaA at a
level of approximately 13% of the wild-type level (Fig .
4b) . In E . coli and S . enterica serovar Typhimurium, mutations
in fliC, which encodes the only protein found in the filament,
do not effect the expression of other flagellar genes (14) .
Thus, the results obtained are similar in some respects to those
obtained with E . coli . However, several species of bacteria
have multiple filament proteins . For example, Caulobacter crescentus
and Vibrio parahaemolyticus have six (16,
47-49), B . hyodysenteriae
has four (41, 58), and
Helicobacter pylori, H . mustelae, and Campylobacter
jejuni have two (35, 62,
65) . In these species, mutants with mutations in
the genes that encode specific filament proteins still synthesize the
other filament proteins at levels close to those seen with the
wild-type strain (35, 41,
49, 62) . Thus, B . burgdorferi is
different from these other species of bacteria, as flaB::kan
did decrease the amount of FlaA .
We investigated the basis of FlaA inhibition in the flaB::kan
mutant strain . The results indicated that there was no change
in the amount of flaA message . These results suggest that the
inhibition of FlaA in the MC-1 is posttranscriptional . Posttranscriptional
control of flagellar gene expression in other species has been
noted . For example, in S . enterica serovar Typhimurium this
control is coupled to the secretion and assembly of basal body
proteins and flagellin (2, 7,
36, 37) . In addition, the membrane protein FlK
regulates translation of the flagellum-specific anti-sigma factor
FlgM in response to flagellar ring assembly (37) .
In C . crescentus, synthesis of both FljK and FljL flagellar
filament proteins have been shown to be under translational control
at specific checkpoints in flagellar assembly (3,
49) . Recently, Limberger et al . isolated a T .
denticola mutant with a mutation in tap1 (44).
tap1 is a homolog to fliK, the flagellar hook assembly
gene found in other bacteria . This mutant failed to make flagellar
filament FlaB proteins, but RT-PCR results indicated that flaB
continued to be transcribed . Because the relative amount of flaB
mRNA in tap1 was not determined, it is unclear whether the
flaB mRNA in the mutant achieved wild-type levels .
There are two likely explanations for the inhibition of FlaA
accumulation in the FlaB mutant . First, FlaA could be degraded by
cell proteases . Spectinomycin inhibition results indicate that
whereas this protein is stable in the wild-type strain, the small
amount detected in the flaB::kan mutant was degraded,
with a half-life of approximately 2 h . This turnover rate relative to
the 8- to 10-h generation time would readily explain the small amount
of FlaA detected in the flaB mutant . To our knowledge, these
results are the first evidence for protein turnover in B .
burgdorferi . Degradation of FlaA in this mutant could be related
to the complicated assembly of spirochete flagellar filaments .
Specifically, FlaB has no signal sequence and is excreted into the
periplasmic space by a type III secretory pathway in a manner similar
to that of other bacterial flagellin (11,
13, 20, 46) . On the
other hand, FlaA of B . burgdorferi and other spirochetes
contains a signal peptidase I cleavage site near its N terminus (20) .
Several lines of evidence indicate that it reaches the periplasmic
space by the type II pathway (13,
20, 21, 23, 26,
42) . Both proteins evidently form a complex in the
periplasmic space for filament formation . Perhaps in the absence of
FlaB, FlaA is more vulnerable to protease digestion . In other
systems, proteins that comprise a complex but fail to pair with their
partners, e.g., RcsA and RcsB in E . coli, are often unstable
and readily degradable (29) . This hypothesis is
further supported by our finding that among the downstream genes in
the flaA operon, the amounts of CheA2 and CheY3 were unaltered
in strain MC-1 compared to the results seen with the wild-type strain
(Fig . 4a) .
Another possible explanation is translational control of FlaA . For
example, perhaps FlaB or another factor acts as a positive effector
for translation of the flaA message . This type of control has
been noted in other systems, such as the Com protein stimulating
translation of mom mRNA in bacteriophage Mu (64) .
Genomic analysis of B . burgdorferi indicates that it has only
a few two-component signal transduction systems, and obvious
operator-repressor systems are not evident (17) .
Recent evidence indicates that RpoN and RpoS are both involved in the
regulation of gene expression in tick and mammalian hosts (32) .
Perhaps B . burgdorferi evolved specific adaptive strategies
for these hosts and consequently shed many of the control mechanisms
found in other bacteria . Along these lines, several other genes
(e.g., genes Bbk2.10 and elpA.1 and genes flaA
and flaB in a flgE mutant) have been identified in
B . burgdorferi for which there was abundant mRNA present but the
level of the encoded protein was undetectable or markedly decreased (30;
Sal et al., Abstr . Bacterial Locomotion and Signal Transduction
Meeting VII) . The results presented here and elsewhere do not allow
us to differentiate which type of mechanism (translational control
versus degradation) is occurring with respect to FlaA regulation and
these other proteins; perhaps both are occurring simultaneously . To
precisely sort this out, rapid pulse-labeling experiments would be
helpful . However, because of the rich nutrient requirements of B .
burgdorferi our attempts to use this approach have so far been
unsuccessful .
We thank A . Barbour, D . Blair, J . Benach, F . Cabello, J . Carroll, B .
Johnson, P . Matsumura, S . Norris, and the late R . Macnab for kindly
sharing strains, monoclonal antibodies, and antisera . We also thank
T . Elliot, M . Hirsch, S . Minnich, J . Olson, E . Rucks, R . Bakker, C .
Li, and D . Yelton for suggestions and critical comments on the
manuscript .
This research was supported by U.S . Public Health Service grant
AI29743 to N.W.C . and American Heart Association grant 0365225B to
M.A.M .
* Corresponding author . Mailing address: Department of
Microbiology, Immunology, and Cell Biology, West Virginia University, Box 9177,
Robert C . Byrd Health Sciences Center, Morgantown, WV 26506-9177 . Phone: (304)
293-4170 . Fax: (304) 293-7823 . E-mail:
ncharon@hsc.wvu.edu .
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