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Journal of Bacteriology, July 2004, p . 4067-4074, Vol . 186,
No . 13
Free
and Hemophore-Bound Heme Acquisitions through the Outer Membrane Receptor HasR
Have Different Requirements for the TonB-ExbB-ExbD Complex
Sylvie Létoffé, Philippe Delepelaire, and Cécile Wandersman*
Unité des Membranes Bactériennes, Institut Pasteur (CNRS URA2172), 75724
Paris Cedex 15, France
Received 18 March 2004/ Accepted 25 March 2004
Many gram-negative bacteria have specific outer membrane receptors
for free heme, hemoproteins, and hemophores . Heme is a major iron
source and is taken up intact, whereas hemoproteins and hemophores
are not transported: the iron-containing molecule has to be stripped
off at the cell surface, with only the heme moiety being taken up .
The Serratia marcescens hemophore-specific outer membrane
receptor HasR can transport either heme itself or heme bound to the
hemophore HasA . This second mechanism is much more efficient and
requires a higher TonB-ExbB-ExbD (TonB complex) concentration than
does free or hemoglobin-bound heme uptake . This requirement for more
of the TonB complex is associated with a higher energy requirement .
Indeed, the sensitivity of heme-hemophore uptake to the protonophore
carbonyl cyanide m-chlorophenyl hydrazone is higher than that
of heme uptake from hemoglobin . We show that a higher TonB complex
concentration is required for hemophore dissociation from the
receptor . This dissociation is concomitant with heme uptake . We
propose that increasing the TonB complex concentration drives more
energy to the outer membrane receptor and speeds up the release of
empty hemophores, which, if they remained on receptors, would inhibit
heme transport .
Iron is an essential compound for cells . Its solubility in the
presence of oxygen at a physiological pH is very low, and it is
therefore biologically unavailable despite its abundance . Due to its
high toxicity, levels of free iron are kept low in living organisms,
and most iron is sequestered by carrier proteins (including
lactoferrin, transferrin, and ferritins) or bound to protoporphyrins
in heme and hemoproteins . Most bacteria have several mechanisms to
acquire iron or heme from the various iron sources they may encounter
in soil and hosts (3) . Some gram-negative bacteria
have specific receptors for the host iron and heme carrier proteins (26) .
They also excrete siderophores, which chelate ferric ions with an
extremely high affinity (22), and hemophores,
which scavenge heme (2, 20) . Heme and
siderophores still loaded with iron are transported as a whole into
the cells . Ferriproteins, host hemoproteins, and hemophores are
stripped of their iron loads at the cell surface, and only the
prosthetic group is transported .
Despite the wide range of iron and heme sources, the gram-negative
bacterial acquisition systems have common features . All of the
systems are encoded by genes belonging to operons regulated by the
repressor Fur loaded with iron (14) . Uptake through the
outer membrane is an energy-driven active transport process . It
involves ligand-specific outer membrane receptors . The three-dimensional
structures of four such receptors in Escherichia coli have been
determined . They are monomeric proteins with a ß-barrel domain
inserted in the outer membrane and an N-terminal domain forming a
cork that closes the channel through the ß barrel (4,
8, 10-12) . For all of
these receptors, active transport is dependent on a protein complex
comprising the inner membrane proteins ExbB, ExbD, and TonB (the TonB
complex) (1) . The periplasmic C-terminal part of
TonB interacts with a short conserved region named the TonB box on
the receptor cork domain, inducing multiple receptor conformational
changes allowing substrate uptake (for reviews, see references
11 and 24) . The two-dimensional structures
of the other iron and heme outer membrane receptors have been
predicted from sequence and functional analogies to fold similarly .
The Serratia marcescens hemophore-dependent heme acquisition
system has been reconstituted in a heme synthesis mutant of
E . coli to allow for exogenous heme utilization . This led to the
identification of the has operon, encoding the hemophore-specific
outer membrane receptor HasR, the hemophore HasA, and the specific
inner membrane hemophore secretion proteins HasD and HasE (13) .
The last gene of the has operon, hasB, encodes a TonB
homolog (23) . The receptor has double functions:
it promotes the uptake of both free and hemophore-bound heme . The
second uptake mechanism is more efficient and allows growth at lower
heme or hemoglobin concentrations . The HasR affinity for apo- and
holo-HasA is about 5 nM, but preliminary results indicate that the
HasR affinity for heme is much lower, at about 1 µM (F . Huché
and N . Izadi, unpublished data) . Purified, exogenously added
hemophore similarly stimulates HasR-dependent heme and hemoglobin
acquisition (13) . The interaction between the hemophore and
its receptor is of a high affinity, does not involve heme, is
mediated by two distinct hemophore segments, and is TonB complex
independent (18) . In contrast, both HasR transport activities
for free and hemophore-bound heme are dependent on the TonB
complex . Heme-hemophore uptake must require additional as yet
uncharacterized steps because heme has to be stripped off at the cell
surface: only the heme moiety is transported through the receptor (21) .
In addition, the fate of the discharged hemophore, once heme has been
taken up, is not understood . It may remain on the receptor, as apo-
and holo-hemophores both bind to the receptor with the same affinity .
In previous work, we dissociated the two HasR activities by
chance . We constructed a hasR gene lacking its own promoter
and Fur box that was transcribed under the control of the arabinose
promoter . In an E . coli heme auxotroph mutant carrying this
gene integrated into the chromosome, direct heme uptake via HasR (at
a high heme concentration) was dependent on arabinose induction . In
contrast, heme-hemophore uptake was not possible under the same
conditions, despite the presence of the inducer arabinose . Moreover,
the exogenous addition of hemophore inhibited free heme acquisition .
We showed that hemophore binding to the receptor is responsible for
the inhibition of heme acquisition . When iron was restricted by the
addition of dipyridyl or when iron repression was abolished by a
fur mutation and arabinose was present, the same strain was able
to use both free and hemophore-bound heme (18) .
Thus, some functions that are essential for heme-hemophore uptake but
not for free heme uptake appear to be under iron-loaded Fur
regulation . Most of the genes involved in iron and heme acquisition,
including the has genes and the tonB, exbB, and
exbD genes, belong to operons regulated by iron via Fur .
Here we show that TonB complex overexpression is required for
heme-hemophore uptake and that the larger requirement for the TonB
complex is associated with a higher energy requirement for
heme-hemophore uptake . We demonstrate that the step which requires
more of the TonB complex is the dissociation of the empty hemophore
from the receptor .
Bacterial strains and plasmids. E . coli C600 (F–
thr leu fhuA lacY thi supE), C600
hemA::Km
(13), and C600 tonB::Tn5 were from our
laboratory collection . pUC18-tonB (previously named PtonB ECpuc)
and pAM238-exbB-exbD (previously named pExbBDpam)
were described previously (23) . PR10K is a
derivative of pBGS19 carrying hasR under the lacp
promoter . pAM238, pUC18 cm, pBAD24, and pBGS19 were from our
laboratory collection . C600 att
::hasR
and PBAD24-hasR were described previously (18) .
pSYC34PAM, pSYC150, and pSYC134-H32A-Y75A-H83A were also described
previously (19) . pNC1 was previously described (5)
and was kindly provided by R . Kadner . An att
µ::hasR
strain was P1 transduced into C600
hemA::Km
with selection for low (25 µg/ml) ampicillin resistance . The tonB
trp::Tn10 mutant of strain H5073 (kindly given by K .
Hantke) was P1 transduced into C600
hemA::Km
att
::hasR .
Media. Bovine hemin and bovine hemoglobin were obtained from
Sigma Chemical Co . Heme was dissolved immediately before use in a
minimal volume of 0.1 N NaOH, centrifuged, and diluted with the
appropriate buffer to the desired concentration . Hemoglobin was
dissolved in 100 mM NaCl . Hemin solutions were filter sterilized with
0.45-µm-pore-size Millipore filters for bacterial growth experiments .
2,3,4,5-[3H]L-leucine was from ICN
Biomedicals . LBD medium contained 0.2 mM 2,2'-dipyridyl to chelate
iron .
-Aminolevulinic
acid was added to Luria-Bertani (LB) medium (LB )
to a final concentration of 20 µg ml–1 for heme auxotroph
growth . The protonophore carbonyl cyanide m-chlorophenyl
hydrazone (CCCP) was obtained from Sigma Chemical Co . CCCP (used at 5
mM) was dissolved in 100% ethanol .
Extraction and manipulation of plasmids. Standard methods
were used for the isolation of plasmids, cloning, restriction map
analysis, and transformation (25) .
Electrophoresis and immunological techniques. Proteins were
analyzed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis
(SDS-PAGE) followed by Coomassie blue staining . An anti-HasR rabbit
polyclonal serum was used for immunodetection at a dilution of
1/5,000 . Anti-ExbD and anti-TonB antibodies were kindly provided by
Peter Howard and Volkmar Braun and were used at a dilution of
1/2,000 .
Expression and purification of HasA proteins. Apo-HasA
wild-type and H32A-Y75A-H83A mutant proteins were obtained from
culture supernatants of strain POP3(pSYC34PAM) and POP3(pSYC150,
pSYC134-H32A-Y75A-H83A) grown at 30°C in M9 Gly medium . The
supernatants were collected, concentrated by 65% ammonium sulfate
precipitation, and then extensively dialyzed against TN buffer (50 mM
Tris-HCl [pH 7.5], 100 mM NaCl) . The heme content of the proteins was
determined from the absorbance at their Soret band wavelength . Less
than 0.5% (mol/mol) of the purified proteins were loaded with heme .
The purity of the protein preparations as estimated from SDS gels was
>99% .
Radiolabeled apo-HasA preparation from culture supernatants.
Twenty milliliters of a culture of strain C600(pSYC34PAM) grown to an
optical density at 600 nm (OD600) of 1.2 in a solution
containing M9 Gly medium, 50 µg of spectinomycin ml–1, 0.4
mM (each) threonine and leucine, 1 mM isopropyl-ß-D-thiogalactopyranoside
(IPTG) (to induce the hasADE operon, which is under lacp
control in the plasmid), and 5 mCi of [3H]L-leucine
was centrifuged for 10 min at 8,000 x
g at 4°C . The supernatant was collected, and the proteins were
precipitated with ammonium sulfate and dialyzed against TN buffer to
remove free [3H]L-leucine . The
final apo-HasA concentration was 10 mg/ml, and the [3H]apo-HasA-specific
activity was 800,000 cpm/µg . Radiolabeled apo-HasA was loaded
with heme by mixing 1 ml of 5 x 10–7
M apo-HasA in TN buffer with 50 µl of 10–5 M heme in TN
buffer and incubating the mixture for 15 min at room temperature .
Heme and hemophore utilization as porphyrin source. Cultures
of C600
hemA::Km
att
::hasR
tonB trp::Tn10 carrying various plasmids were grown in LB
medium supplemented with 20 µg of
-aminolevulinic
acid/ml and appropriate antibiotics to an OD600 of 1 .
Aliquots of 100 µl were plated on LB agar-0.02% arabinose as
indicated in Table 1 . All experiments were repeated
more than six times .
TABLE 1 . Growth of C600
hemA
strains with heme or hemophore as the sole protoporphyrin source
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Recycling of hemoglobin and holo-hemophore. C600(pBAD24 + pNC1)
and C600(pBAD24-hasR + pNC1) and their isogenic tonB::Tn5
derivatives C600 tonB::Tn5(pBAD24 + pNC1) and C600
tonB::Tn5(pBAD24-hasR + pNC1) were grown exponentially in 0.4%
M9 Gly medium with 0.2% Casamino Acids to an OD600 of 0.1,
induced with 0.002% L-arabinose, and grown to
an OD600 of 1 . The bacteria were harvested, washed, and
resuspended to an OD600 of 10 in 0.4% M9 Glu medium with
0.2% Casamino Acids containing various concentrations of CCCP . The
incubation was continued for 40 min at 37°C (6) .
Aliquots of 900 µl were mixed with 100 µl of either hemoglobin or
holo-HasA to final concentrations of 4 x
10–6 and 3.5 x 10–6 M,
respectively . These concentrations are roughly 10 times higher than
the concentration of HasA binding sites on HasR (3
x 10–7 M) at an OD600
of 10 . They were chosen to ensure that only a small proportion
(10%) of extracellular hemoproteins could bind to HasR-producing
cells . The mixtures were incubated for 180 min at 37°C on a rotary
shaker, and the cells were removed by centrifugation . The heme
content of each supernatant was determined from the UV-visible
absorption spectra by using culture supernatants containing CCCP at
the same various concentrations, but no hemoproteins, as blanks .
tonB mutants do not transport free or hemoprotein-bound heme, and
the drop in heme content of the supernatant after incubation with
tonB mutant strains is a measure of hemoprotein binding to
HasR-producing cells . Ten percent of the holo-HasA was bound to C600
tonB::Tn5(pBAD24-hasR) (data not shown) . Hemoglobin
did not bind to either tonB+ or tonB mutant
HasR-producing strains, suggesting that heme is acquired from
hemoglobin by diffusion to HasR without a stable complex formation
(data not shown) . The absorption at 407 nm of the supernatant from
the control cultures (which do not produce HasR) was identical to
that of the initial hemoprotein solutions . Recycling was calculated
as the difference between the decrease in absorption at 407 nm
of the supernatant after incubation with strain C600(pBAD24 + pNC1)
and that with strain C600(pBAD24-hasR + pNC1) . For HasA, a 10%
absorption decrease due to binding was subtracted for each point .
Liquid-phase radiolabeled HasA binding assay. C600 att
::hasR(pUC18,
pAM238) and its control strain without hasR, C600(pUC18,
pAM238); the isogenic tonB mutant C600 att
::hasR
tonB trp::Tn10(pUC18, pAM238) and its control strain
without hasR, C600 tonB trp::Tn10(pUC18, pAM238); and the
isogenic strain overexpressing TonB-ExbB-ExbD, C600 att
::hasR
tonB trp::Tn10(pUC18-tonB, pAM238-exbB-exbD),
and its control strain without hasR, C600 tonB trp::Tn10(pUC18-tonB,
pAM238-exbB-exbD), were grown to an OD600 of 1 in
LB broth-0.02% arabinose, harvested, and washed in TN buffer, and 1
OD600 of the HasR-producing strains was mixed with 9 OD600
of the control strains (which lack the hasR gene) in a 900-µl
volume such that the bacterial density corresponded to an OD600
of 10 in all experiments . These samples were mixed with 100 µl of
various concentrations (3, 8, and 30 nM) of radioactive apo- and
holo-HasA in TN buffer . HasA was allowed to bind to cells for 15 min
at 4°C on a rotary shaker . All of the binding experiments were
performed at 4°C to minimize heme uptake . The cells were removed by
centrifugation in a microcentrifuge for 10 min at 8,000
x g at 4°C, and 400-µl
aliquots of the supernatants were mixed with 4 ml of Fluoran
scintillation liquid and counted in a Beckman liquid scintillation
counter . For each HasA concentration, the radioactivity associated
with HasR-producing cells was measured as the decrease in unbound
radioactivity present in the supernatant . Specific binding was
calculated as the difference between the unbound radioactivity of the
control strain (which does not produce HasR) and that of the
preparations of cells expressing HasR . Binding to the control strain
was <5% of the binding to cells expressing HasR .
Displacement of radiolabeled apo-HasA by cold apo- and holo-HasA.
Strains C600 att
::hasR(pUC18,
pAM238), C600 att
::hasR
tonB trp::Tn10(pUC18, pAM238), and C600 att
::hasR
tonB trp::Tn10(pUC18-tonB, pAM238-exbB-exbD)
were grown as described above . After the binding of 30 nM
radiolabeled protein, as described above, at 4°C followed by washing
in TN buffer at 4°C, the cells were resuspended in 1 ml of M9-0.4%
Glu medium containing various amounts of wild-type unlabeled apo- and
holo-hemophores at concentrations from 0 to 1 µM, a mutant unlabeled
protein (HasA H32A-Y75A-H83A) at concentrations of 0 and 1 µM, hemin
alone at a concentration of 10 µM, or a mixture of free hemin (10 µM)
and mutant protein (1 µM) . Samples were incubated for a further
2 h at 30°C . The cells were removed by centrifugation in a
microcentrifuge for 10 min at 8,000 x g
at 4°C, and 400-µl aliquots of the supernatants were mixed with 4 ml
of Fluoran scintillation liquid and counted in a Beckman liquid
scintillation counter to measure unbound radioactivity . All binding
reactions were performed in duplicate . All of these experiments were
repeated three times .
Dissociation of HasR-mediated utilization of heme from that of
hemophore-bound heme. Strain C600
hemA::Km
att
::hasR
carries the hasR gene under the control of arabinose (18) .
The amounts of HasR produced are dependent on arabinose induction, as
assessed by immunodetection with anti-HasR antibodies (Fig.
1) . An arabinose concentration of 0.02% was used
for the growth tests . Strain C600
hemA::Km
att
::hasR
is a heme auxotroph and was tested for the ability to use exogenous
heme and thus to bypass the heme synthesis mutation and grow
aerobically . The strain was plated on LB agar with 0.02% arabinose .
Heme at concentrations from 0.1 to 10 µM was placed in wells in the
agar . The strain growth was dependent on the porphyrin source
concentration . The strain grew strongly around wells containing 10 µM
heme and poorly around wells containing 1 µM heme . There was no
growth at 0.1 µM heme (Table 1) . The introduction
of a tonB mutation into C600
hemA::Km
att
::hasR
abolished heme utilization without affecting HasR production (Table
1 and Fig . 1) . This demonstrates
that heme uptake by this strain is TonB dependent, which is
consistent with previous results . No growth was observed around wells
containing hemophore loaded with 50% heme (holo-hemophore), even at
10 µM holo-hemophore, the highest concentration tested (Table
1) . Thus, by using heme instead of hemoglobin and a
test based on growth around wells containing various concentrations
of heme and hemophore, we obtained the same paradoxical finding as in
our previous work: there is a dissociation between free and
hemophore-bound heme uptake via HasR in iron-rich medium (18) .
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FIG . 1 . HasR immunodetection . Cells were grown in LB medium with 0.02%
arabinose at 30°C to an OD600 of 1 . The cell pellets were
washed, and the proteins precipitated with trichloroacetic acid . A 0.2
OD equivalent was loaded in each lane of an SDS-10% PAGE gel . The
relevant genotypes are indicated on the figure . HasR was immunodetected
with a polyclonal anti-HasR serum used at a dilution of 1/5,000.
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HasR-mediated heme-hemophore utilization requires larger amounts of
TonB-ExbB-ExbD than does HasR-mediated heme uptake. Strain C600
hemA::Km
att
::hasR
can use holo-hemophore as a heme source on iron-chelated medium (18) .
The hemophore is the most efficiently used heme source . Possibly
genes required for heme-hemophore utilization are induced in
iron-chelated medium .
TonB-ExbB-ExbD expression is repressed threefold by the iron-loaded
Fur repressor (15) . We therefore tested whether these
three proteins have to be induced to allow heme-hemophore
utilization .
tonB and exbB-exbD mutations carried on compatible plasmids
under the lacp promoter and without their Fur-regulated promoters
(pUC18-tonB and pAM238-exbB-exbD) were introduced together
into C600
hemA::Km
att
::hasR
tonB trp::Tn10 . The strains were analyzed by
immunoblotting with anti-TonB and anti-ExbD antibodies . Their
presence led to an approximately 15-fold overproduction of TonB and
ExbD proteins, as measured by immunoblot scanning (Fig .
2) . There was no change in HasR levels (data not shown) . The
amount of TonB that was immunodetected in total membrane preparations
was lower (about 50% lower [data not shown]) in cells overexpressing
TonB alone than in those overexpressing all three proteins . To
avoid alterations in the protein complex stoichiometry, we performed
the following experiments with strains that overexpressed all three
TonB-complex proteins .
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FIG . 2 . TonB and ExbD immunodetection . SDS-PAGE of samples and
immunodetection of whole-cell extracts were performed . Cells were grown
in LB medium at 30°C to an OD600 of 1 . The cell pellets were
washed, and the proteins were precipitated with trichloroacetic acid . A
0.5 OD equivalent was loaded in each lane of an SDS-12% PAGE gel . (A)
Anti-TonB polyclonal serum . (B) Anti-ExbD polyclonal serum . Both sera
were used at a dilution of 1/2,000 . Lanes: 1, C600 hemA
att
::hasR;
2, C600 hemA
att
::hasR
tonB trp::Tn10(pUC18-tonB, pAM238-exbB-exbD);
M, molecular size marker.
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Heme and heme-hemophore utilization were tested as described above .
Strain C600
hemA::Km
att
::hasR
tonB trp::Tn10(pUC18-tonB, pAM238-exbB-exbD)
grew around wells containing 0.1 µM holo-hemophore (Table
1) . Thus, hemophore-heme was acquired in the
presence of larger amounts of TonB-ExbB-ExbD than those allowing heme
acquisition . At this higher concentration of the TonB complex,
hemophore was the best heme source, as it is in iron-chelated medium .
More energy is required for heme-hemophore uptake than for
heme-hemoglobin uptake. The TonB complex is involved in the
transduction of energy from the proton motive force (pmf) to the
outer membrane receptors . We tested whether the requirement for a
higher TonB complex concentration for heme-hemophore uptake
corresponds to a requirement for a higher membrane potential for
heme-hemophore than for heme uptake by comparing the relative pmf
dependence of heme and heme-hemophore uptake . Hemoprotein recycling
into an apo-protein by HasR-producing strains is a simple way to
measure heme uptake . The heme status of hemoproteins is easily
measured by absorption spectrometry at the Soret band (around 407
nm); free heme gives a large absorption peak and the concentration is
harder to quantify . Bovine hemoglobin is found mostly in the
methemoglobin form, which has a weak affinity for heme (N . Izadi,
personal communication) . It behaves like free heme in the growth test
described above, i.e., it does not require larger amounts of the TonB
complex to be used as a heme source by HasR-producing strains (18) .
Thus, we compared holo-hemophore and hemoglobin recycling by
HasR-producing cells in the presence of a series of concentrations of
CCCP, a protonophore which dissipates the pmf . We used a strain
carrying pNC1, overproducing ExbB, ExbD, and TonB (data not shown),
and pBAD24-hasR, which produces 10 times more HasR than C600
att
::hasR
when induced with arabinose (data not shown) . The amounts of HasR
produced by this plasmid were identical in tonB+
and tonB mutant backgrounds, as determined by Western blotting
(data not shown) . We first confirmed that, as expected, strain C600
hemA::Km(pBAD24-hasR)
used bovine hemoglobin at 10 µM but did not use the heme provided by
the hemophore and that strain C600
hemA::Km(pBAD24-hasR,
pNC1) grew around wells containing 0.1 µM holo-hemophore . Thus, HasR
expressed from pBAD-hasR gives the same phenotype as that
described above for att
::hasR
(data not shown) . We used isogenic hemA+ strains to
avoid having to add
-aminolevulinic
acid to the cultures, as this partially derepresses heme synthesis
and leads to heme excretion out of the cells . C600(pBAD24, pNC1) and
C600(pBAD24-hasR, pNC1) and the corresponding isogenic tonB::Tn5
strains were prepared, preincubated with various concentrations of
CCCP, and mixed with either hemoglobin or holo-HasA as described in
Materials and Methods . Recycling was calculated as indicated in
Materials and Methods . In the absence of CCCP, 65% of the holo-HasA
was recycled to the apo form . Similar experiments indicated that 18%
of the hemoglobin was recycled after incubation with C600(pBAD24-hasR,
pNC1) in the absence of CCCP . Thus, hemophore recycling was more
efficient than hemoglobin recycling . This was probably due to the
weaker affinity of the receptor for heme than for HasA . Nevertheless,
the hemoglobin unloading range was HasR and TonB dependent,
reproducible, and large enough to allow CCCP inhibition experiments .
Hemophore recycling was inhibited 50% by 10 µM CCCP and entirely
blocked by 15 µM CCCP (Fig . 3) . Hemoglobin
recycling was blocked only at 100 µM CCCP . Thus, holo-hemophore
recycling is much more sensitive than hemoglobin recycling to pmf
depletion (Fig . 3) .
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FIG . 3 . Effect of CCCP concentration on hemophore and hemoglobin
recycling . Supernatants from cultures of C600(pBAD24, pNC1) and
C600(pBAD24-hasR, pNC1) treated with various CCCP concentrations
and controls incubated with either hemophore (•) or hemoglobin (+)
were harvested . The heme content was determined from the UV-visible
absorption spectra for culture supernatants containing CCCP at the same
concentrations but no hemoproteins, which were used as blanks . For each
sample, hemoprotein binding to HasR-producing strains was 10% for HasA
and not detectable (<1%) for hemoglobin (in CCCP-treated cultures or
tonB mutant derivatives) . Recycling was calculated as the difference
between the decrease in the absorption of the supernatant at 407 nm
after incubation with strain C600(pBAD24, pNC1) and that with strain
C600(pBAD24-hasR, pNC1) . For HasA, a 10% absorption decrease due
to binding was subtracted for each point.
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Overproduction of TonB-ExbB-ExbD does not alter the affinities of apo-
and holo-HasA for HasR-producing strains. Apo- and holo-hemophores were
previously shown to have the same affinity for HasR-producing cells .
However, their relative affinities were measured without varying the
TonB-ExbB-ExbD level .
To test whether the overproduction of TonB-ExbB-ExbD promoted the
displacement of empty hemophores by enhancing the affinity of HasR
for the holo-hemophore, we measured the affinity of radiolabeled apo-
and holo-hemophore for binding to whole cells expressing HasR . HasR
is under the control of arabinose in these strains, and preliminary
experiments were done with C600 att
::hasR
to determine the total numbers of HasA binding sites at various
arabinose concentrations . An arabinose concentration of 0.02%, giving
a HasA binding site concentration of 3 nM at an OD of 1, was chosen
for the following binding experiments . Strains C600 att
::hasR
tonB trp::Tn10(pUC18-tonB, pAM238-exbB-exbD)
and C600 att
::hasR
tonB trp::Tn10(pUC18, pAM238) and the control strains
lacking hasR, C600 tonB trp::Tn10(pUC18-tonB,
pAM238-exbB-exbD) and C600 tonB trp::Tn10(pUC18
and pAM238), were exponentially grown in LB medium with 0.02%
arabinose and were resuspended at various OD600 values to
determine the total number of HasA sites . Strains expressing HasR
(the tonB mutant and the strain overproducing TonB) had the
same binding site concentration (3 nM at an OD600 of 1)
for apo- and holo-HasA . Aliquots of exponentially growing cells
adjusted to an OD of 1 were prepared and mixed with various amounts
of radiolabeled proteins as described in Materials and Methods . The
specific binding was saturable (Fig . 4) and similar
for apo- (not shown) and holo-HasA proteins and was similar for the
tonB mutant and the strain overproducing TonB and expressing
HasR . These findings were consistent with the published binding
affinities of apo- and holo-HasA in strain POP3(pR10K) (shown for
comparison in Fig . 4 [closed circles]) (19) .
Theoretical binding curves with Kds of 1, 10, and 20 nM,
together with the fit of the POP3(pR10K) data (thick line; Kd
= 5.9 nM), showed that the apparent Kds were not
significantly different for the different strains . Thus, TonB complex
overexpression did not modify the apparent affinity of the hemophore
for its receptor at 4°C . Yet hemophore dissociation could be an
energy-consuming process that occurs only in metabolically active
cells . A Kd estimation in the nanomolar range could not
be determined for energized cells because of the drop in the heme
concentration resulting from heme uptake .
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FIG . 4 . In vivo interaction of holo-HasA with HasR in various strain
backgrounds . The data reported are the amounts of holo-HasA bound to the
cells versus the total holo-HasA concentration (see Materials and
Methods for details) . •, POP3(pR10K);
,
C600 att
::hasR(pAM238,
pUC18);
,
C600 att
::hasR
tonB trp::Tn10(pAM238, pUC18);
,
C600 att
::hasR
tonB trp::Tn10(pAM238exbB-exbD, pUC18-tonB) .
The thick line represents the fit with the POP3(pR10K) data . The data
were fit with Kaleidagraph software using a simple binding equation with
one class of sites: the fitted parameters were Kd =
5.9 ± 0.6 nM, and the total receptor concentration was 3.5 ± 0.1 nM (R
= 0.998) . The thin lines represent theoretical binding curves with the
same total receptor concentration and Kds of 1, 10,
and 20 nM.
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Hemophore dissociation is dependent on TonB-ExbB-ExbD overproduction.
Since we did not see any difference in affinities at 4°C, we studied
hemophore dissociation at 30°C in metabolically active cells .
Radiolabeled apo-HasA or holo-HasA (30 nM) was allowed to bind to the
various strains for 15 min at 4°C . The cells were centrifuged and
washed once in buffer to remove unbound proteins . The samples were
resuspended in M9 medium with 0.4% glucose and incubated at 30°C .
Samples were taken after 30 min and after 2 and 12 h, and the
released radioactivity was counted . Using radiolabeled apo- and
holo-HasA, we could not detect apo- or holo-hemophore dissociation in
any of these strains (data not shown) . Possibly, in the absence of
unlabeled competitors, rebinding occurs . Thus, the dissociation of
radiolabeled apo-HasA was tested in the presence of unlabeled
competitors as follows . Radiolabeled apo-HasA was allowed to bind to
the various strains for 15 min at 4°C as described above . The
cells were centrifuged and washed once in buffer to remove unbound
proteins . The samples were resuspended in M9 medium with 0.4%
glucose containing various concentrations (from 10 nM to 1 µM) of
unlabeled apo-HasA or holo-HasA and then incubated at 30°C . Samples
were taken after 30 min and after 2 and 12 h, and the released
radioactivity was counted . Less than 3% of the radioactivity was
released in the presence of unlabeled apo-HasA . In the presence of
holo-HasA, only the strain overexpressing the TonB-ExbB-ExbD complex
released radioactivity . The release was concentration dependent and
was 63% at the highest holo-HasA concentration (1 µM) (Fig.
5A) . This maximum level was reached after 2 h and
did not increase with further incubation (data not shown) . These
results show that hemophore displacement is TonB-ExbB-ExbD dependent
and occurs only when this complex is overproduced . No radioactivity
release was observed (<1% in 2 h) when the cells were incubated with
holo-HasA in buffer or M9 medium without any carbon source or at 4°C .
This suggests that the displacement is energy driven .
|
FIG . 5 . Radiolabeled apo-HasA release . The dissociation of [3H]apo-HasA
from C600 att
::hasR(pUC18,
pAM238), C600 att
::hasR
tonB trp::Tn10(pUC18, pAM238), and C600 att
::hasR
tonB trp::Tn10(pUC18-tonB, pAM238-exbB-exbD)
was measured . After 15 min of binding of 30 nM [3H]apo-HasA
and washing to remove unbound proteins at 4°C, various concentrations of
unlabeled apo- and holo-HasA were added and incubation was continued for
2 h at 30°C . The radioactivity released is reported as a percentage of
the total specific radioactive binding . Values are means of three
different experiments . The standard deviations were <1% in all
experiments . (A) Radiolabeled apo-HasA displacement according to the
concentration of unlabeled apo-HasA (white bars) or holo-HasA (black
bars) added . Strains: a, C600 att
::hasR(pUC18,
pAM238); b, C600 att
::hasR
tonB trp::Tn10(pUC18, pAM238); c, C600 att
::hasR
tonB trp::Tn10(pUC18-tonB, pAM238-exbB-exbD) .
(B) Radiolabeled apo-HasA displacement by hemin (10 µM) in the presence
and absence of the unlabeled mutant protein, H32A-Y75A-H83A . Strains a,
b, and c are the same as for panel A . Values are means of three
different experiments . The standard deviations were <1% in all
experiments . (C) Radiolabeled apo-HasA displacement by the unlabeled
H32A-Y75A-H83A mutant alone . Strains a, b, and c are the same as for
panel A.
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|
Since displacement was observed only with the holo-hemophore, it may
be concomitant with heme uptake or transfer to the receptor . We thus
tested whether free heme could induce a hemophore release . Free heme
alone did not allow hemophore displacement (Fig . 5B) .
This could be due to rebinding of the labeled protein in the
absence of unlabeled competitors . To test whether free heme could
promote hemophore turnover, we mixed it with a protein that is unable
to bind heme but that still binds to the receptor with a high
affinity . The H32A-Y75A-H83A mutant is such a HasA mutant protein,
which has no detectable affinity for heme (Kd > 10–5
M) but binds to HasR as well as the wild-type HasA protein (19) .
In the presence of unlabeled H32A-Y75A-H83A protein alone, <3% of the
radioactivity was released (Fig . 5C) . In the
presence of heme and the mutant protein, the radioactivity was
released only from the strain overexpressing the TonB-ExbB-ExbD
complex (Fig . 5B); 62% of the bound radioactivity was released
(Fig . 5B) in this case . The H32A-Y75A-H83A mutant does
not bind heme, showing that free heme is as efficient as the
holo-hemophore for inducing hemophore release from the receptor . Heme
could induce hemophore release either by reaching the receptor
directly or through binding to the hemophore first, followed by a
transfer to the receptor .
Inhibition of heme assimilation by the mutant hemophore HasA
H32A-Y75A-H83A. To test whether heme can bind to a receptor that is
already loaded with hemophore and displace it, we tested heme uptake
in the presence of an exogenously added mutant hemophore . Strain
C600
hemA::Km
att
::hasR
tonB trp::Tn10(pUC18-tonB, pAM238-exbB-exbD)
grew around wells containing 10 µM heme . This growth was entirely
inhibited by the addition of 1 µM mutant HasA protein into the wells
(Table 1) . This suggests that heme cannot reach its
binding site on a receptor that is loaded with hemophore and cannot
drive empty mutant hemophore release .
HasR has a double function in heme acquisition: it acts as both a
free and a hemophore-bound heme receptor . Expressing HasR in an
iron-rich medium allowed us to dissociate these two HasR functions:
free heme acquisition was possible but the acquisition of heme from
the hemophore was not .
Here we describe an investigation of functions that can restore
hemophore utilization in an iron-rich medium . The overexpression of
TonB, ExbB, and ExbD (the TonB complex) on multicopy plasmids under
lacp promoter control (which leads to a 15-fold overproduction
of the complex) restored hemophore utilization as the best heme
source . This indicates that an uninduced TonB complex in iron-rich
medium is limiting for hemophore-heme uptake, but not for direct heme
uptake via HasR . Kadner and Heller also described the TonB complex as
limiting and showed that two substrates (ferrichrome and vitamin B12)
with different outer membrane TonB-dependent receptors compete for
TonB (16) . Assaying the TonB components in
iron-rich and chelated media indicated that the number of copies of
each protein was roughly multiplied by 3 in the presence of 200 µM
iron chelator dipyridyl (15) .
The TonB-ExbB-ExbD complex couples outer membrane transport to the
pmf, which provides energy for ligand transport . We investigated
hemoprotein recycling by using hemoglobin and hemophore . Hemophore
unloading was more sensitive than hemoglobin unloading to CCCP
treatment (there was a 50% inhibition at 10 µM CCCP for hemophore and
at 50 µM CCCP for hemoglobin) . Since increasing the CCCP
concentration decreases the pmf, this strongly suggests that the two
processes differ in terms of energy requirements .
We then investigated which steps require a higher TonB complex
concentration . TonB is not required for apo- and holo-hemophore
binding to the receptor . Both apo- and holo-HasA bind with the same
affinity and compete when mixed prior to binding, indicating
identical or overlapping binding sites . Yet the overexpression of the
TonB complex could modify the relative holo- and apo-hemophore
affinities for the receptor . We compared the affinities of both
hemophores and they were similar to those measured with tonB
mutant or tonB+ strains and strains overexpressing TonB, ExbB,
and ExbD . Thus, the overexpression of the TonB complex does not
promote hemophore-heme uptake by enhancing the affinity of the
holo-hemophore . This suggested that the interactions of apo- and
holo-HasA with HasR differ only in energized cells . However, since
heme permease mutants are not available, hemophore affinities could
only be measured at 4°C . At temperatures above 25°C, heme uptake in
tonB+ strains will complicate the Kd
estimation . To overcome this limitation, we designed experiments to
measure hemophore dissociation from energized cells expressing HasR .
Using radiolabeled apo-HasA bound to HasR-producing cells, we
measured the radioactive HasA release in the presence of an excess of
unlabeled competitors . Neither wild-type apo-HasA nor the mutant
protein H32A-Y75A-H83A, which does not bind heme, could displace the
bound radioactive protein . Only holo-HasA displaced radiolabeled
apo-HasA in a concentration-dependent way . This occurred only in
cells overexpressing TonB, ExbB, and ExbD . This dissociation did not
occur at 4°C, but it did occur at 30°C and in the presence of a
carbon source, suggesting that it is energy driven .
Thus, the overexpression of the TonB complex strongly increases
the rate of hemophore dissociation from the receptor . This dissociation
is not driven by apo-HasA, indicating that it is concomitant
with either heme uptake or heme transfer from the hemophore to the
receptor .
Free heme in the presence of the mutant protein H32A-Y75A-H83A,
which does not bind heme, as an unlabeled competitor was also able to
dissociate the bound radioactive protein, but only in cells
overexpressing TonB, ExbB, and ExbD . This clearly shows that the
hemophore bound to the receptor can be loaded with heme and is
released during the heme transport process . However, the empty
hemophore release could be due to either the heme transport itself or
heme transfer from the hemophore to the receptor .
The mutant hemophore H32A-Y75A-H83A inhibits heme uptake even when
the TonB-ExbB-ExbD complex is overproduced . This suggests that the
mutant hemophore, and presumably the wild-type hemophore as well,
when bound to the receptor could prevent the direct access of free
heme to its site on the receptor . Thus, it is still not established
whether hemophore release is induced by a heme transfer from the
hemophore to the receptor or during the heme uptake step . Studies of
transferrin-iron uptake in Neisseria have led to similar
conclusions by showing that transferrin binds with similar high
affinities to both tonB+ and tonB mutants
and that TonB-driven energy is required for transferrin release .
However, it remains unclear whether iron uptake is required for
apo-transferrin release (9) .
How the TonB complex in the inner membrane causes hemophore
release at the cell surface is unclear . Most likely, it unfolds the
bound HasA through a HasR-mediated conformational change which
decreases the affinity of HasA for HasR, allowing the release of
empty hemophores . This event is concomitant with heme uptake and must
occur at a speed that is sufficient to allow loaded hemophores to
replace ejected empty hemophore molecules . Otherwise, the system is
blocked: apo-hemophores remain bound to HasR and most likely do not
extract heme from surrounding extracellular hemophores . On the other
hand, free heme uptake is still possible at a low TonB complex
concentration, as there is no inhibitory state . It is currently
believed that the TonB complex functions as a motor that uses the pmf
through a proton channel comparable to the MotA/MotB flagellar motor
(7, 27) . Here we show that
heme-hemophore use consumes more energy than heme-hemoglobin uptake .
We propose that increasing the TonB complex concentration facilitates
the use of the pmf to increase the speed of hemophore turnover . A
recent publication reported that TonB-dependent phenotypes are
variably sensitive to cellular TonB levels (17) .
It is possible that the various levels of TonB requirements do not
only reflect the sensitivity of each assay, but also mechanistic
needs .
We gratefully acknowledge Laurent Debarbieux and Jean Marc Ghigo for
helpful discussions . We thank Rachel Binet and Julie Deleule for help
with plasmid constructions, Volkmar Braun for anti-TonB antibodies,
and Robert Kadner for the pNC1 plasmid .
* Corresponding author . Mailing address: Unité des Membranes
Bactériennes, Institut Pasteur (CNRS URA2172), 25 rue du Dr . Roux, 75724 Paris
Cedex 15, France . Phone: 33 1 40613275 . Fax: 33 1 45688790 . E-mail: cwander@pasteur.fr .
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