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Journal of Bacteriology, July 2004, p . 4199-4208, Vol . 186,
No . 13
Identification of Inducers of the Yersinia enterocolitica Phage Shock
Protein System and Comparison to the Regulation of the RpoE and Cpx
Extracytoplasmic Stress Responses
Michelle E . Maxson and Andrew J . Darwin*
Department of Microbiology, New York University School of Medicine, New York,
New York 10016
Received 7 January 2004/ Accepted 1 April 2004
Known inducers of the phage shock protein (Psp) system suggest that
it is an extracytoplasmic stress response, as are the well-studied
RpoE and Cpx systems . However, a random approach to identify
conditions and proteins that induce the Psp system has not been
attempted . It is also unknown whether the proteins or mutations that
induce Psp are specific or if they also activate the RpoE and Cpx
systems . This study addressed these issues for the Yersinia
enterocolitica Psp system . Random transposon mutagenesis identified
null mutations and overexpression mutations that increase
(pspA-lacZ)
operon fusion expression . The results suggest that Psp may respond
exclusively to extracytoplasmic stress . Null mutations affected
glucosamine-6-phosphate synthetase (glmS), which plays a role
in cell envelope biosynthesis, and the F0F1 ATPase (atp
operon) . The screen also revealed that in addition to several
secretins, the overexpression of three novel putative inner membrane
proteins (IMPs) induced the Psp response . We also compared induction
of the Y . enterocolitica Psp, RpoE, and Cpx responses .
Overexpression of secretins or the three IMPs or the presence of an
atpB null mutation only induced the Psp response . Similarly,
known inducers of the RpoE and Cpx responses did not significantly
induce the Psp response . Only the glmS null mutation induced
all three responses . Therefore, Psp is induced distinctly from the
RpoE and Cpx systems . The specific IMP inducers may be valuable tools
to probe specific signal transduction events of the Psp response
in future studies .
Misfolding and/or mislocalization of envelope proteins induce
extracytoplasmic stress responses in bacteria . The RpoE and Cpx
systems of Escherichia coli and its relatives are well-studied
examples (reviewed in references 41 and 42) .
These systems control many genes, with some overlap between their
regulons, which encode proteases, envelope protein folding factors,
and several proteins of unknown function (10,
41, 43) . Mounting a response to
extracytoplasmic stress is extremely important . rpoE is an
essential gene in E . coli (14) and Yersinia
enterocolitica (21), although this is
apparently not the case in the closely related Salmonella
genus (23) .
The RpoE response is important for virulence in Salmonella enterica
serovar Typhimurium (23, 45) and
Vibrio cholerae (30) . In addition, the RpoE
and Cpx responses are induced by the overproduction of P pilus
subunits from uropathogenic E . coli (25), and the
Cpx system affects assembly and expression of the P pilus (24) .
The Cpx system is also important for the attachment of E . coli
to surfaces (37), which is a critical step during
biofilm formation .
The phage shock protein (Psp) system may be another example of an
extracytoplasmic stress response . pspA operon expression,
studied most extensively in E . coli K-12, is induced by the
mislocalization of secretin proteins and by environmental conditions
that induce the RpoE response (reviewed in reference 35) . The
precise inducing signal of the Psp response is unknown, as is
its physiological role . However, the PspA protein helps maintain the
proton motive force (PMF) when a mutant PhoE porin is overproduced in
E . coli (29) . Dissipation of the PMF could be a signal
that induces the Psp response . Besides PspA, the other proteins
encoded by the psp locus are only known to play roles in
regulating expression of the pspA operon itself (35) .
A working model for induction of the Psp response is derived from
published studies of E . coli (reviewed in reference 35)
and Y . enterocolitica (12) . pspA promoter
activity depends on the enhancer binding protein PspF (27) .
PspF activity is negatively controlled by an interaction with the
peripheral inner membrane protein PspA (4,
17) . The current hypothesis is that when the Psp
response is active, the inner membrane proteins PspB and PspC detect
an inducing signal and interact with PspA . This prevents PspA from
interfering with PspF, and PspF-dependent genes are induced (the Psp
response) . Under noninducing conditions, PspA is free to interfere
with PspF, and PspF-dependent genes are not expressed . This model
awaits direct experimental investigation, although interactions among
the PspA, PspB, and PspC proteins do occur (1) .
The Psp response has been shown to play an important role in a
virulent organism, the gastrointestinal pathogen Y . enterocolitica
(11, 12) . Different psp null
mutations have various effects on the virulence of this organism,
with some (e.g., pspC) causing complete attenuation (12).
Y . enterocolitica pspA operon expression is induced when the
Ysc type III secretion system is produced, and this is apparently due
to mislocalization of the YscC secretin (12) .
Furthermore, YscC secretin mislocalization inhibits the growth of
some psp null mutants .
Although published data suggest that the Psp system may only
respond to extracytoplasmic stress, this hypothesis has not been
addressed in an unbiased manner . Therefore, in this study we randomly
identified genes that induce the Y . enterocolitica Psp
response when they are overexpressed or disrupted . If the
extracytoplasmic stress response hypothesis is correct, then the
overexpressed genes would be expected to encode cell envelope
components or proteins involved in controlling their expression or
processing . Null mutations that induce the Psp response would be
expected to affect the cell envelope or some of its protein
components . A second aim of this study was to investigate whether
inducers of the Psp response are specific or whether they also induce
the RpoE and Cpx extracytoplasmic stress responses .
Bacterial strains, plasmids, and routine growth conditions. The
bacterial strains and plasmids used in this study are shown in Table
1 . For routine plasmid manipulations, the E . coli host
strain was DH5 ,
CC118
pir,
S17-1
pir,
or SM10
pir .
E . coli strains were grown at 37°C, and Y . enterocolitica
strains were grown at 26 or 37°C as noted . Strains were routinely
grown in Luria-Bertani (LB) broth or on LB agar plates (33) .
The antibiotics used were ampicillin (200 µg ml–1),
streptomycin (50 µg ml–1), spectinomycin (50 µg ml–1),
nalidixic acid (20 µg ml–1), trimethoprim (100 µg ml–1),
kanamycin (75 µg ml–1 for E . coli, 100 µg ml–1
for Y . enterocolitica), and chloramphenicol (25 µg ml–1
for E . coli, 12.5 µg ml–1 for Y . enterocolitica) .
| TABLE 1 . Strains and plasmids used in this study
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Transposon construction, mutagenesis, and mutant characterization.
An
1.5-kb
fragment from plasmid pMAL-p2, encoding lacIq and
tacp, was amplified by PCR with the lacI Up SpeI and tacp
Dwn SpeI primers (Table 2) . This fragment was
cloned into the unique SpeI site of pTnMod-RKm', and the
desired orientation was confirmed by restriction digest analysis . The
resulting plasmid was named pAJD428 .
| TABLE 2 . Primers used in this study
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For transposon mutagenesis, pAJD428 was transferred from E . coli
S17-1
pir
to Y . enterocolitica strain YVM576 by conjugation as described
previously (11) . Transposon insertion mutants with
increased
(pspA-lacZ)
expression were identified as described in Results .
A Southern blot assay with the kanamycin resistance gene of the
transposon as a probe was done to ensure that each mutant contained a
single transposon insertion and to determine the size of the EcoRI
fragment containing the transposon and flanking DNA (data not shown) .
The conditional R6K ori of the transposon was used to recover
transposon-chromosome junctions as replicating plasmids . Briefly,
chromosomal DNA was digested with EcoRI and then treated with T4 DNA
ligase . The ligation mixture was used to transform E . coli
CC118
pir
to kanamycin resistance . Restriction digest analysis was done to
confirm that each plasmid contained the transposon fragment predicted
by the Southern blot assay . The DNA sequence of the
transposon-chromosome junction was determined with primer tacp
Tn P7 .
ß-Galactosidase assays. Cultures were routinely grown in LB
broth buffered with 100 mM 3-(N-morpholino)propanesulfonic
acid (MOPS; pH 7) . In some experiments, the medium was buffered with
100 mM 2-(N-morpholino)ethanesulfonic acid (MES; pH 5.5 or 6)
or 100 mM N-tris(hydroxymethyl)methyl-3-aminopropanesulfonic
acid (TAPS; pH 8 or 9), as indicated later in the text or figure
legends . In most experiments, saturated cultures were diluted into 5
ml of medium in 18-mm-diameter test tubes, either with or without 1
mM IPTG . The initial optical density (600 nm) was approximately 0.05 .
The cultures were grown on a roller drum at 26 or 37°C until an
optical density of
0.6
was reached (approximately 4 to 8 h; mid-exponential phase) . In some
cases, cultures were grown for 24 h (late stationary phase) . When
ready, cultures were immediately chilled on ice and cells were
collected by centrifugation .
Cultures used to determine the effect of overexpressing genes
cloned into plasmid pVLT35 were grown differently (12) owing
to toxic effects when some of the genes were present in multiple
copies . Saturated cultures were diluted into 5 ml of medium in
18-mm-diameter test tubes . The initial optical density (600 nm) was
approximately 0.05 . The cultures were grown on a roller drum at 37°C
for 2 h . A 0.2 mM final concentration of IPTG was then added to
induce tacp promoter expression . Growth continued at 37°C for
2 h more prior to harvest .
ß-Galactosidase enzyme activity was determined at room temperature
(approximately 22°C) in permeabilized cells as described previously (31) .
Activities are expressed in arbitrary Miller units (33) .
Individual cultures were assayed in duplicate, and values were
averaged from at least three independent cultures, the standard error
of which was not more than 15% .
red recombinase mutagenesis. The
red recombinase system (13) was adapted for Y .
enterocolitica, which is naturally ampicillin resistant . The
red recombinase expression plasmid pKD46 (13)
encodes ampicillin resistance and cannot be used . Therefore, a
fragment encoding trimethoprim resistance was inserted into the
unique PstI site of pKD46 . The resulting plasmid, pAJD434, was
transferred into Y . enterocolitica by electroporation .
The gene replacement system was used to insert a cassette encoding
kanamycin resistance, lacIq, and an outward-facing tac
promoter at specific chromosomal locations . A 2.9-kb kan lacIq
tacp fragment was amplified from pAJD428 by PCR . Primer pairs
(Table 2) were designed with 42 nucleotides at
their 5' ends that were homologous to regions flanking the desired
chromosomal insertion site . The PCR product was introduced into Y .
enterocolitica strain YVM576, containing pAJD434, by
electroporation . Mutant colonies were isolated on LB agar containing
kanamycin . The strains were cured of plasmid pAJD434, and the
insertion was confirmed by Southern hybridization analysis (data not
shown) .
The
red recombinase system was also used to construct
glmS
and
atpB
in-frame deletions . The kanamycin resistance gene of pKD13 was
amplified by PCR with primers that included 42 nucleotides homologous
to the 5' or 3' end of glmS or atpB (Table 2) .
The PCR product was introduced into Y . enterocolitica strain
JB580v, containing pAJD434, by electroporation . To remove the
chromosomally inserted kanamycin resistance gene and leave an
in-frame "scar," plasmid pLH29, encoding IPTG-inducible FLP
recombinase, was introduced into each mutant by electroporation .
Following FLP-mediated excision of the kan gene, the strains
were cured of pLH29 and checked by Southern blot analysis (data not
shown) . The deleted region was amplified by PCR, and the sequence of
the product was determined to confirm an in-frame deletion .
Construction of plasmid pVLT33/35 derivatives. Genes were
amplified from chromosomal DNA by PCR with primer pairs that annealed
immediately upstream and downstream of each gene and incorporated
unique restriction sites, and in some cases a C-terminal six-His tag
(Table 2) . The fragments were cloned into plasmid
pVLT33 or pVLT35, and the DNA sequence of each fragment was
confirmed .
Construction of
(cpxP-lacZ)
and
(rpoE-lacZ)
operon fusion strains. cpxR'-cpxP' and nadC'-rpoE'
fragments were amplified from chromosomal DNA by PCR and cloned into
the pFUSE derivative pKN8 (Table 1) . The sequence
of each fragment was checked . These fusions were integrated onto the
Y . enterocolitica chromosome by homologous recombination .
Following integration, the merodiploid strains encode intact cpxP
and rpoE genes under the control of their native promoters, in
addition to the
(cpxP-lacZ)
and
(rpoE-lacZ)
operon fusions . Correct integration was checked by Southern
hybridization analysis (data not shown) .
Western blot assays. Total cell proteins were separated by
sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE)
on gels containing 12.5% polyacrylamide . Proteins were transferred to
nitrocellulose by electroblotting . Chemiluminescence detection
followed sequential incubation with penta-His monoclonal primary
antibody (QIAGEN) used at a 1-in-2,000 dilution and then goat
anti-mouse immunoglobulin G-horseradish peroxidase conjugate
(Bio-Rad) used at a 1-in-5,000 dilution .
Screen for induction of the Psp response. To identify null
mutations and overexpressed genes that induce
(pspA-lacZ)
expression, we constructed a transposon encoding the E . coli lac
repressor, an outward-facing tac promoter, and a conditional
origin of replication . This transposon causes null mutations by
insertional activation and/or IPTG-dependent overexpression of
downstream genes . A similar strategy was pioneered with a Tn5
derivative that lacked the conditional replication origin (7) .
Transposon insertion mutants of a
(pspA-lacZ)
operon fusion strain were identified after growth in the presence of
IPTG at either 26 or 37°C on MacConkey-lactose or
LB-5-bromo-4-chloro-3-indolyl-ß-D-galactopyranoside
(X-Gal) indicator agar . Mutants with increased
(pspA-lacZ)
expression were identified as red (MacConkey) or dark blue (X-Gal)
colonies, which was confirmed by ß-galactosidase enzyme assay .
The screen was done with a virulence plasmid-free strain to
avoid induction of
(pspA-lacZ)
expression by the Ysc type III secretion system (12) .
We anticipated that many of the insertions would be in the psp
locus . The transposon tac promoter could be inserted upstream
of the
(pspA-lacZ)
operon fusion . Alternatively, increased expression of some psp
genes, or inactivation of pspA, increases
(pspA-lacZ)
expression (12) . Therefore, we used multiplex PCR to
amplify the psp locus from each transposon mutant as three
separate fragments . Alteration of the sizes of these fragments
indicated disruption of the psp locus, and these mutants were
eliminated from further analysis (data not shown) .
Approximately 100,000 random TnMod-RKm'-lacIqtacp
insertion mutants were screened on indicator plates . One hundred
sixty-two mutants had increased
(pspA-lacZ)
activity in ß-galactosidase enzyme assays . Multiplex PCR analysis
indicated that 54 of these did not have insertions within the psp
locus, and their transposon-chromosome junctions were isolated as
plasmids . In a few cases, the plasmids did not have the expected
restriction patterns or the cloning failed . For the remaining
mutants, the DNA sequence adjacent to the transposon insertion was
determined and used to locate the insertion sites in the complete
Y . enterocolitica genome sequence .
Overexpression of different secretins induces
(pspA-lacZ)
expression. Most mutants had an IPTG-dependent increase in
(pspA-lacZ)
expression, indicating that tacp-dependent overexpression of a
gene(s) downstream of the transposon was responsible . These
insertions were mapped to seven loci (Fig . 1) .
During preliminary characterization, we noticed that in some cases
the level of
(pspA-lacZ)
expression was significantly affected by the growth temperature . We
do not understand the reason for this, but ß-galactosidase
assay data for one mutant for each locus, grown at 26 or 37°C, are
presented in Table 3 .
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FIG . 1 . Overexpression mutations that induce the Psp response . A flag
shows the approximate location of each transposon insertion, and the
arrow shows the orientation of the tac promoter . Closed flags
indicate the mutants used to determine the data shown in Table
3, and they are also listed in Table 1 .
Open reading frames are shown as horizontal arrows in the direction of
their transcription . Genes labeled with numbers indicate the Y .
enterocolitica ortholog of the annotated Y . pestis CO92
genome (e.g., 0432 = YPO0432 ortholog) . Genes responsible for inducing
(pspA-lacZ)
expression are boxed (see text).
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TABLE 3 . TnMod-RKm'-lacIq tacp mutants
with IPTG-dependent induction of
(pspA-lacZ)
expression
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The virulence plasmid-encoded YscC secretin was previously shown to
induce
(pspA-lacZ)
expression (12) . However, it was a relatively weak
inducer (fivefold), even when it was overexpressed from a multicopy
plasmid . Considering that the inducers identified here were
overexpressed from the chromosome, many of them were more efficient
inducers than YscC . This was confirmed when the new inducers were
overexpressed from multicopy plasmids (see below) . Even so, the
overexpression inducers varied in the ability to increase
(pspA-lacZ)
expression from 2- to 94-fold (Table 3) .
Four of the loci had a secretin gene downstream of the transposon
insertion (Fig . 1) . It is reasonable to assume that
overexpression of the secretin gene is responsible for the phenotype .
The virulence plasmid YscC secretin induces
(pspA-lacZ)
expression in Y . enterocolitica (12), and
several secretins induce PspA synthesis in E . coli (35) .
Three Psp response overexpression inducers are putative inner
membrane proteins. Three of the loci identified in mutants with an
IPTG-dependent increase in
(pspA-lacZ)
expression do not encode secretins (the lower three loci in Fig.
1) . In each case, there were multiple genes
downstream of the transposon tacp promoter .
A combination of two procedures was used to identify the downstream
gene responsible for inducing
(pspA-lacZ)
expression . The
red recombinase system was used to insert a lacIqtacp
cassette immediately upstream of specific downstream genes (see
Materials and Methods) . Alternatively, individual or multiple
downstream genes were cloned into tacp expression plasmid
pVLT33 . This analysis revealed that for each of the three loci a
single gene was responsible for inducing the Psp response . These were
the ampE, yggT, and YPO0432 ortholog genes (Fig.
1) . Each of these genes is predicted to encode a
conserved inner membrane protein of unknown function .
Psp system overexpression inducers do not induce other
extracytoplasmic stress responses. Many previous Psp studies did not
determine whether the inducing proteins, mutations, or conditions
also induced other extracytoplasmic stress responses such as the RpoE
and Cpx systems . Therefore, we compared activation of the Y .
enterocolitica Psp, RpoE, and Cpx systems in response to
overexpression of some of the genes identified in the screen .
Y . enterocolitica strains were constructed with single-copy
(rpoE-lacZ)
and
(cpxP-lacZ)
operon fusions to monitor induction of the RpoE and Cpx responses,
respectively . The RpoE and Cpx responses of E . coli are
specifically induced by overexpression of the ompX and cutF
(nlpE) genes, respectively (32, 44) .
Therefore, the Y . enterocolitica orthologs of these genes were
used as positive controls . The ysaC, yggT, ampE,
YPO0432 ortholog, ompX, and cutF genes were cloned into
the tac promoter expression plasmid pVLT35 . We then tested
their effects on
(pspA-lacZ),
(cpxP-lacZ),
and
(rpoE-lacZ)
expression .
Each reporter fusion behaved as expected . The best inducers of
(pspA-lacZ)
expression were ysaC, yggT, ampE, and the YPO0432
ortholog, which induced expression by approximately 30-fold to
more than 100-fold (Fig . 2) . This was higher induction than
that which occurred in the original transposon insertion mutants
(Table 3) because the genes were expressed from
multicopy plasmids . CutF was the most efficient inducer of
(cpxP-lacZ)
expression (more than 40-fold), and OmpX induced
(rpoE-lacZ)
expression by approximately 3-fold . The fold induction of
(rpoE-lacZ)
expression by ompX was small but reproducible . This is
probably due at least in part to the fact that the basal level of
expression from this fusion was high (approximately 2,000 Miller
units; data not shown) . Overexpression of ompX also has
relatively small effects on some RpoE-dependent promoters in E .
coli (e.g., see references 8 and
32) . Therefore, although the sensitivity may be limited, the
(rpoE-lacZ)
fusion is a suitable reporter for induction of the RpoE system .
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FIG . 2 . Overexpression inducers are specific for the Psp, Cpx, and RpoE
stress responses . Plasmid pVLT35 derivatives encoding the indicated
genes expressed from the tac promoter were transferred into
(pspA-lacZ),
(cpxP-lacZ),
and
(rpoE-lacZ)
operon fusion strains YVM576, AJD243, and AJD242, respectively . Strains
were grown as described in Materials and Methods, in the absence of IPTG
(white bars) or with 0.2 mM IPTG (black bars) . In most cases, cells were
harvested for ß-galactosidase assays 2 h after addition of IPTG . The one
exception was the yggT overexpression strains, which were
harvested in late stationary phase (22 h after addition of IPTG) . For
each fusion strain, the fold induction of ß-galactosidase activity is
with respect to the activity of the strain containing the pVLT35 vector
plasmid alone, harvested at the same time point as the test strain . The
basal expression level of each fusion (i.e., with pVLT35) in Miller
units was 73 for
(pspA-lacZ),
190 for
(cpxP-lacZ),
and 1,730 for
(rpoE-lacZ).
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The four Psp inducers did not affect
(rpoE-lacZ)
expression (Fig . 2) . Similarly, yggT and the
YPO0432 ortholog did not induce
(cpxP-lacZ)
expression . With IPTG, the tacp-ysaC plasmid induced
(pspA-lacZ)
expression by 114-fold but also had a minor inducing effect on
(cpxP-lacZ)
expression (7-fold) . However, in the absence of IPTG the tacp-ysaC
plasmid still induced
(pspA-lacZ)
expression by 46-fold but no longer induced
(cpxP-lacZ)
expression (Fig . 2) . With 0.2 mM IPTG, the tacp-ampE
plasmid induced
(pspA-lacZ)
expression by 31-fold but also induced
(cpxP-lacZ)
expression by 6-fold . However, reducing the IPTG concentration to
0.01 mM did not significantly reduce the fold induction of
(pspA-lacZ)
expression (approximately 26-fold; data not shown) but reduced
induction of
(cpxP-lacZ)
expression by 50% (from sixfold to threefold; data not shown) .
The RpoE inducer OmpX had no effect on the Psp response (Fig .
2) . There was some induction of
(pspA-lacZ)
expression by the Cpx inducer CutF when 0.2 mM IPTG was used for
induction (Fig . 2) . However, with 0.04 mM IPTG the
tacp-cutF plasmid no longer induced
(pspA-lacZ)
expression but still induced
(cpxP-lacZ)
expression by 44-fold (data not shown) .
Taken together, these results indicate that there is no overlap
between these proteinaceous inducers of the Psp response and those of
the RpoE and Cpx responses . Each system appears to be exquisitely
sensitive to the production of specific cell envelope proteins .
Detection of overexpressed proteins. We considered the
possibility that the inner membrane protein inducers indirectly
affect the outer membrane protein profile . We were also interested to
know if the overexpression plasmids led to massive protein
overproduction . Therefore, strains containing the pVLT35 vector or
the ysaC, ampE, yggT, or YPO0432 ortholog
overexpression plasmids were grown as for the ß-galactosidase assay
experiments in Fig . 2 . Cells were separated into cytoplasm,
periplasm, inner membrane, and outer membrane fractions . None
of the proteins were overexpressed sufficiently to allow their
identification by Coomassie brilliant blue-stained SDS-PAGE (data not
shown) . Furthermore, none of the overexpression plasmids had a global
effect on protein profiles in any subcellular fraction (data not
shown) .
The inability to detect Psp-inducing proteins by Coomassie brilliant
blue-stained SDS-PAGE made it important to confirm that the
overexpression plasmids increased the levels of these proteins .
Therefore, we constructed expression plasmids carrying ysaC,
ampE, yggT, or the YPO0432 ortholog with six-His tags at their
C termini . These plasmids were still able to induce
(pspA-lacZ)
expression (data not shown) . Strains containing these plasmids
were grown as for the ß-galactosidase assay experiments in Fig.
2, and total cell proteins were separated by SDS-PAGE
and detected following Western blotting with anti-penta-His
antibody (Fig . 3) . Each of the proteins was detected in the
presence of IPTG . Overexposure of the film also revealed a low
level of each protein in the absence of IPTG (data not shown) .
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FIG . 3 . Detection of Psp response-inducing proteins . Strains containing
plasmid pVLT35 (vector) or derivatives encoding the indicated genes were
grown as described in the Fig . 2 legend . Total cell
proteins were separated by SDS-12.5% PAGE, transferred to
nitrocellulose, and detected with a penta-His antibody as described in
Materials and Methods . The signals generated by the six-His-tagged
proteins are underscored with asterisks . Molecular weights of the
detected proteins were estimated by comparison to a prestained molecular
weight marker (not shown) . Note that the YPO0432 ortholog did not
resolve from the dye front on the gel owing to its small size
(approximately 6 kDa) . –, no IPTG; +, 0.2 mM IPTG.
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Only secretins specifically inhibit the growth of a pspC null
mutant. In addition to inducing
(pspA-lacZ)
expression, overexpression of the YscC secretin inhibits the growth
of a pspC null mutant (12) . Therefore,
secretin overexpression may cause a stress that cannot be tolerated
in the pspC null mutant . The novel overexpression inducers
identified here may cause the same stress as secretins, or they may
induce by a different mechanism .
To begin to investigate this, we determined the effect of overexpressing
the ysaC secretin, yggT, ampE, and the YPO0432
ortholog on the growth of pspC+ and
pspC
mutant strains as described previously (12) .
Expression of the ysaC secretin gene completely inhibited
growth of the
pspC
mutant without significantly affecting the pspC+
strain (data not shown) . However, none of the other expression
plasmids specifically inhibited the growth of the
pspC
mutant (data not shown) . These experiments were done with various
concentrations of IPTG to control the expression level of the
inducers, but the conclusion was the same (data not shown) .
These experiments suggest that overexpression of either ampE,
yggT, or the YPO0432 ortholog does not cause a stress that
specifically affects a pspC null mutant, despite the fact that
they induce the Psp response . This may indicate that the mechanism by
which they induce
(pspA-lacZ)
expression is different from that of secretin proteins such as YsaC
and YscC .
Disruption of the F0F1 ATPase specifically
induces the Psp response during growth at alkaline pH. A minority of
the mutants identified in the screen demonstrated IPTG-independent
induction of
(pspA-lacZ)
expression (data not shown) . Most of these mutants had insertions in
the atpA or atpB gene (Fig . 4), which
encode components of the F0F1 proton-translocating
ATPase that interconverts PMF and ATP .
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FIG . 4 . Null mutations that induce the Psp response . A flag represents
the approximate location of each transposon insertion, and the arrow
shows the orientation of the tac promoter . Open reading frames
are shown as horizontal arrows in the direction of their transcription.
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The pH of unbuffered LB increases during growth of Y . enterocolitica .
This causes an approximately twofold increase in
(pspA-lacZ)
expression (data not shown) . The ß-galactosidase assays
described so far were done with LB medium buffered to pH 7 . In
preliminary experiments with unbuffered medium, we noticed that the
atp null mutations increased
(pspA-lacZ)
expression significantly . However, they did not do so if the medium
was buffered to pH 7 (the pH did not significantly affect other
inducers identified in this screen) . Therefore, we investigated
the effect of the external pH on
(pspA-lacZ)
expression in atp+ and atp null strains .
The atpA and atpB insertion mutations significantly increased
(pspA-lacZ)
expression at pH 8 . After 8 h (mid-exponential phase),
(pspA-lacZ)
expression was induced approximately five- and eightfold in the
atpA and atpB mutants, respectively (data not shown) .
Induction was much higher in late stationary phase (24 h; 10-fold for
the atpA mutant and 22-fold for the atpB mutant; data not
shown) . At pH 7, the atpA and atpB null mutations had a
less-than-twofold effect on
(pspA-lacZ)
expression (data not shown) .
We also investigated whether an atp null mutation induced the
RpoE and Cpx responses . An atpB in-frame deletion mutation was
combined with either the
(pspA-lacZ),
the
(cpxP-lacZ),
or the
(rpoE-lacZ)
fusion . The strains were grown at 26°C into mid-exponential phase (8
h) or late stationary phase (24 h) at pH 7 or 8, and ß-galactosidase
activity was determined (Fig . 5) . The
atpB
mutation had an effect on
(pspA-lacZ)
expression similar to that of the original transposon insertion
mutation (Fig . 5 and data not shown) . In contrast,
expression of
(cpxP-lacZ)
and
(rpoE-lacZ)
was indistinguishable in atpB+ and
atpB
strains . However, we observed that
(cpxP-lacZ)
expression was significantly induced at pH 8 compared to pH 7 (Fig.
5) . An inducing effect of elevated pH has also been
reported for the cpxP gene of E . coli (9),
which offers a further indication that the Cpx responses of Y .
enterocolitica and E . coli are regulated similarly . Although
alkaline pH alone was sufficient to induce
(cpxP-lacZ)
expression, induction of
(pspA-lacZ)
required both alkaline pH and an atp null mutation . This
suggests different mechanisms underlying the effects of alkaline pH
on the Psp and Cpx responses .
|
FIG . 5 . Effects of an atpB null mutation and alkaline pH on the
Psp, Cpx, and RpoE systems.
(pspA-lacZ),
(cpxP-lacZ),
and
(rpoE-lacZ)
operon fusion strains YVM576, AJD243, and AJD242, respectively (WT [wild
type]), or their
atpB
derivatives (Table 1) were grown at 26°C after
inoculation of cultures to an initial optical density at 600 nm of 0.05 .
Cultures were grown in LB medium buffered to either pH 7 or 8, and
samples were taken after 8 h (white bars) or 24 h (black bars) for
ß-galactosidase assays (Sp . Act . = specific activity; see Materials and
Methods).
|
|
We also determined the effect of an expanded range of pH values on
the ability of an atpB null mutation to induce the Psp response .
The results showed that an atpB mutation did not significantly
induce
(pspA-lacZ)
expression at pH 5.5, 6, or 7 but did induce it at pHs 8 and 9 (data
not shown) . There was no significant difference in the fold induction
at pHs 8 and 9, although at pH 9 there was a toxic effect on the
growth of atpB+ and atpB null strains . These
experiments confirm that an atpB null mutation only induces
the Psp response during growth at alkaline pH .
A glmS null mutation causes general induction of
extracytoplasmic stress responses including Psp. One of the
IPTG-independent mutants did not grow on MacConkey agar . It grew
poorly on LB agar and reached a low cell density in liquid culture
before undergoing an apparent lysis event (not shown) . The transposon
had inserted into a homolog of the E . coli glmS gene (Fig.
4), which encodes glucosamine-6-phosphate
synthetase . This mutation caused an approximately 14-fold induction
of
(pspA-lacZ)
expression (data not shown) . GlmS converts fructose 6-phosphate,
produced by glycolysis, into glucosamine 6-phosphate . Glucosamine
6-phosphate is a precursor for the biosynthesis of several cell
envelope components (lipid A, O-antigen, enterobacterial common
antigen, and peptidoglycan; 40) . Therefore, a cell wall
biosynthesis defect of the glmS mutant may be responsible for
inducing
(pspA-lacZ)
expression .
The growth defect of an E . coli glmS mutant is relieved by addition
of D-glucosamine to the growth medium (47) .
Furthermore, a cell wall biosynthesis defect might be expected to
induce other extracytoplasmic stress responses, in addition to Psp .
Therefore, we constructed an in-frame deletion mutation of glmS
and determined its effect on
(pspA-lacZ),
(cpxP-lacZ),
and
(rpoE-lacZ)
expression in the presence or absence of D-glucosamine .
The
glmS
mutation induced
(pspA-lacZ)
expression by approximately 20-fold in the absence of
D-glucosamine but did not cause any induction in the presence
of D-glucosamine (data not shown) . In the
absence of D-glucosamine, the
glmS
mutation also induced
(cpxP-lacZ)
and
(rpoE-lacZ)
expression by 29- and 4-fold, respectively (data not shown) . Once
again, the induction did not occur in the presence of
D-glucosamine .
These results demonstrate that the glmS null mutation causes
general induction of extracytoplasmic stress responses, rather
than being a specific inducer of the Psp system . It is likely that
major disruption of the cell envelope has many effects on the cell
that trigger the precise inducing signals of multiple stress response
systems .
Conservation of inducing signals between the Y . enterocolitica
and E . coli Psp responses. To rule out strain-specific factors,
we determined whether the specific Psp inducers identified here also
induce the E . coli Psp response . The tacp expression
plasmids were introduced into E . coli strain MC3, which has a
single-copy
(pspA-lacZ)
operon fusion (3) . The strains were grown at 37°C
in the presence of 0.2 mM IPTG, and ß-galactosidase activities were
determined . The ysaC, ampE, yggT, and YPO0432
ortholog expression plasmids induced E . coli
(pspA-lacZ)
expression by 75-, 36-, 51-, and 21-fold, respectively (data not
shown) .
The Y . enterocolitica and E . coli PspA proteins are 78%
identical (12) . Therefore, we also used a Y .
enterocolitica PspA polyclonal antiserum to detect Y .
enterocolitica and E . coli PspA proteins in atpB+
and atpB null strains (Table 1) grown for 24 h at pH
7 or 8 . In both Y . enterocolitica and E . coli, the PspA
protein was most abundant in atpB null mutants grown at pH 8
(data not shown) .
Observations, primarily from E . coli studies, suggest that the
Psp system responds to stress that occurs in the cell envelope
(reviewed in reference 35) . Like the well-studied RpoE and
Cpx systems, Psp appears to consist of inner membrane proteins (PspB
and PspC) that communicate the presence of an extracytoplasmic
stress to cytoplasmic proteins (PspA and PspF) . Here we addressed the
questions of whether Psp is likely to be exclusively a response to
extracytoplasmic stress and if there is overlap among induction of
the Psp, RpoE, and Cpx responses .
The Psp system responds to extracytoplasmic stress. The
screen identified seven protein inducers of the Y . enterocolitica
Psp response (Table 3) . Four are predicted to be
secretins, which adds to the YscC secretin that was known to induce
(pspA-lacZ)
expression (12) . Primary sequence analysis of the other
three inducers predicts that they are likely to be associated with
the inner membrane (data not shown) . This would be a novel finding
because all previously known inducers of the Psp response are
outer membrane proteins (secretins and mutant PhoE and LamB porins of
E . coli) . The identification of secretins and putative inner
membrane protein inducers, coupled with the failure to identify any
cytoplasmic inducers, strongly suggests that the Psp system responds
exclusively to extracytoplasmic stress .
We also isolated one mutation that is predicted to affect the
integrity of the cell envelope, an insertion in the glmS gene .
It was not surprising to find that a glmS null mutation also
induces the Cpx and RpoE extracytoplasmic stress responses . The
glmS mutation serves to support the characterization of Psp as an
extracytoplasmic stress response, but its future analysis is unlikely
to tell us anything about the precise nature of the inducing signal .
atp null mutations induce the Psp response. We
isolated several insertions in the atpA and atpB genes, which
encode subunits of the F0F1 ATPase . AtpA is subunit
of the F1 sector, and AtpB is subunit a of the
proton-translocating F0 sector (19) .
This reversible enzyme complex interchanges the two energy currencies
of the cell, ATP and the PMF . In E . coli, expression of a
localization-defective PhoE protein induces the Psp response and also
reduces the PMF in a pspA null strain (29) .
The authors of that study hypothesized that one function of PspA is
to help maintain the PMF under stress conditions and that PMF
dissipation is the inducing signal . As our study was under way, it
was shown that depletion of the E . coli YidC protein induces
the Psp response (46) and this was also confirmed
in a later study (26) . YidC depletion leads to instability of
the F0F1 ATPase and cytochrome o oxidase and
causes depletion of the PMF (46) . However, YidC
depletion has pleiotropic effects on many E . coli membrane
proteins (6), rather than specifically affecting
the F0F1 ATPase . In contrast, our data show a specific
link between loss of the F0F1 ATPase and Psp
induction .
atp null mutations only induced
(pspA-lacZ)
expression in alkaline growth media (Fig . 5) . The
PMF is made up of the sum of the pH gradient across the membrane ( pH)
and the membrane potential ( ;
negative charge inside, positive outside) . The E . coli cytoplasmic
pH is maintained at 7.6 to 7.8 over a wide range of external pH
values (38, 39) . Something similar
probably occurs in Y . enterocolitica . Therefore, with neutral
or acidic medium there would always be a positive contribution of
pH
to the PMF . In basic growth medium, the
pH
would have a negative contribution to the PMF, which might make the
role of the F0F1 ATPase important to prevent
induction of the Psp response . However, we stress that we do not yet
have any data that link the atp null mutations to changes in
the PMF under any growth conditions .
Overexpression inducers of the Psp response. The screen
identified seven genes that induce the Psp response when they are
overexpressed . Four encode outer membrane secretin proteins,
including the Yts1D and YsaC secretins, which were the most potent
inducers (Table 3) . The other three are all
predicted to encode inner membrane proteins, which is a class of
proteins not previously implicated in inducing psp gene expression
(except for the inner membrane pspC gene) . All seven of these
overexpression inducers were specific for the Psp response .
However, we do not understand the mechanism(s) by which they cause
induction . This is confounded by the fact that the three inner
membrane proteins have no known function in any bacterial species .
However, the Vibrio alginolyticus YggT homolog was at least
implicated in the transport of K+ ions and has sequence
similarity to other K+ transporters and the E . coli Na+/H+
antiporter NhaB (36) . Perhaps overexpression of
Y . enterocolitica YggT causes aberrant ion transport, which could
adversely affect the membrane potential .
One possible unifying hypothesis for all of the overexpression
inducers is that their overexpression depletes the PMF . It seems that
secretin mislocalization causes severe stress in Y . enterocolitica
because it inhibits the growth of a pspC null mutant (data not
shown and reference 12) . However, overexpression of
ampE, yggT, and the YPO0432 ortholog did not specifically
affect the growth of a pspC null mutant (data not shown) .
Perhaps there is a fundamental difference in how secretins and the
putative inner membrane proteins (IMPs) induce the Psp response .
Summary. This study provides support for the hypothesis that
the Psp system is likely to respond exclusively to extracytoplasmic
stress and that there is little overlap between induction of
the Psp, RpoE, and Cpx responses . The demonstration that atp
null mutations induce the Psp response is consistent with a role for
PMF in induction but does not prove it . The novel IMP Psp inducers
should be valuable tools in future studies to investigate Psp signal
transduction events . A major goal of future work will be to address
the role of these inducers on maintenance of the PMF and/or in
transducing a signal to the Psp system .
We thank Virginia Miller, Michael Cox, Friederike Turnowsky, and the
E . coli Genetic Stock Center for providing strains and
plasmids . We are grateful to Heran Darwin, Virginia Miller, and
Valley Stewart for critical review of the manuscript . Y .
enterocolitica genome sequence data were produced by the Y .
enterocolitica Sequencing Group at the Sanger Institute and can
be obtained from
http://www.sanger.ac.uk/Projects/Y_enterocolitica/ .
This study was supported by Public Health Service grant AI-052148
from the National Institute of Allergy and Infectious Diseases and by
a grant from the Speaker's Fund for Biomedical Research: toward the
Science of Patient Care, awarded by the City of New York .
* Corresponding author . Mailing address: Department of
Microbiology MSB 228, New York University School of Medicine, 550 First Ave.,
New York, NY 10016 . Phone: (212) 263-3223 . Fax: (212) 263-8276 . E-mail: darwia01@med.nyu.edu .
- Adams, H., W . Teertstra, J . Demmers, R . Boesten, and J .
Tommassen. 2003 . Interactions between phage-shock proteins in
Escherichia coli . J . Bacteriol . 185:1174-1180 .
- Bäumler, A . J., R . M . Tsolis, A . W . M . van der Velden, I .
Stojiljkovic, S . Anic, and F . Heffron. 1996 . Identification of a new iron
regulated locus of Salmonella typhi . Gene 183:207-213.
- Bergler, H., D . Abraham, H . Aschauer, and F . Turnowsky.
1994 . Inhibition of lipid biosynthesis induces the expression of the pspA
gene . Microbiology 140:1937-1944.
- Bordes, P., S . R . Wigneshweraraj, J . Schumacher, X . Zhang, M .
Chaney, and M . Buck. 2003 . The ATP hydrolyzing transcription activator
phage shock protein F of Escherichia coli: identifying a surface that
binds sigma 54 . Proc . Natl . Acad . Sci . USA 100:2278-2783 .
- Butlin, J . D., G . B . Cox, and F . Gibson. 1971 . Oxidative
phosphorylation in Escherichia coli K12: mutations affecting magnesium
ion- or calcium ion-stimulated adenosine triphosphatase . Biochem . J . 124:75-81.
- Chen, M., K . Xie, F . Jiang, L . Yi, and R . E . Dalbey.
2002 . YidC, a newly defined evolutionarily conserved protein, mediates
membrane protein assembly in bacteria . Biol . Chem . 383:1565-1572.
- Chow, W . Y., and D . E . Berg. 1988 . Tn5tac1, a
derivative of transposon Tn5 that generates conditional mutations .
Proc . Natl . Acad . Sci . USA 85:6468-6472.
- Danese, P . N., and T . H . Silhavy. 1997 . The
E
and the Cpx signal transduction systems control the synthesis of periplasmic
protein-folding enzymes in Escherichia coli . Genes Dev . 11:1183-1193.
- Danese, P . N., and T . J . Silhavy. 1998 . CpxP, a
stress-combative member of the Cpx regulon . J . Bacteriol . 180:831-839 .
- Dartigalongue, C., D . Missiakas, and S . Raina. 2001 .
Characterization of the Escherichia coli sigma E regulon . J . Biol .
Chem . 276:20866-20875 .
- Darwin, A . J., and V . L . Miller. 1999 . Identification of
Yersinia enterocolitica genes affecting survival in an animal host
using signature-tagged transposon mutagenesis . Mol . Microbiol . 32:51-62.
- Darwin, A . J., and V . L . Miller. 2001 . The psp
locus of Yersinia enterocolitica is required for virulence and for
growth in vitro when the Ysc type III secretion system is produced .
Mol . Microbiol . 39:429-444.
- Datsenko, K . A., and B . L . Wanner. 2000 . One-step
inactivation of chromosomal genes in Escherichia coli K-12 using PCR
products . Proc . Natl . Acad . Sci . USA 97:6640-6645 .
- De Las Penas, A., L . Connolly, and C . A . Gross. 1997.
E
is an essential sigma factor in Escherichia coli . J . Bacteriol . 179:6862-6864.
- de Lorenzo, V., L . Eltis, B . Kessler, and K . N . Timmis.
1993 . Analysis of Pseudomonas gene products using lacIq/Ptrp-lac
plasmids and transposons that confer conditional phenotypes . Gene 123:17-24.
- Dennis, J . J., and G . J . Zylstra. 1998 . Plasposons:
modular self-cloning minitransposon derivatives for rapid genetic analysis of
gram-negative bacterial genomes . Appl . Environ . Microbiol . 64:2710-2715 .
- Dworkin, J., G . Jovanovic, and P . Model. 2000 . The PspA
protein of Escherichia coli is a negative regulator of
54-dependent
transcription . J . Bacteriol . 182:311-319 .
- Ellison, D . W., B . Young, K . Nelson, and V . L . Miller.
2003 . YmoA negatively regulates expression of invasin from Yersinia
enterocolitica . J . Bacteriol . 185:7153-7159 .
- Harold, F . M., and P . C . Maloney. 1996 . Energy
transduction by ion currents, p . 283-306 . In F . C . Neidhardt, R . Curtis
III, J . L . Ingraham, E . C . C . Lin, K . Brooks Low, B . Magasanik, W . S .
Reznikoff, M . Riley, M . Schaechter, and H . E . Umbarger (ed.), Escherichia
coli and Salmonella: cellular and molecular biology . ASM Press,
Washington, D.C.
- Herrero, M., V . de Lorenzo, and K . N . Timmis. 1990 .
Transposon vectors containing non-antibiotic resistance selection markers for
cloning and stable chromosomal insertion of foreign genes in gram-negative
bacteria . J . Bacteriol . 172:6557-6567.
- Heusipp, G., M . A . Schmidt, and V . L . Miller. 2003 .
Identification of rpoE and nadB as host responsive elements of
Yersinia enterocolitica . FEMS Microbiol . Lett . 226:291-298.
- Huang, L. 1997 . Convenient and reversible site-specific
targeting of exogenous DNA into a bacterial chromosome by use of the FLP
recombinase: the FLIRT system . J . Bacteriol . 179:6076-6083.
- Humphreys, S., A . Stevenson, A . Bacon, A . B . Weinhardt, and
M . Roberts. 1999 . The alternative sigma factor,
E,
is critically important for the virulence of Salmonella typhimurium .
Infect . Immun . 67:1560-1568 .
- Hung, D . L., T . L . Raivio, C . H . Jones, T . J . Silhavy, and
S . J . Hultgren. 2001 . Cpx signaling pathway monitors biogenesis and
affects assembly and expression of P pili . EMBO J . 20:1508-1518 .
- Jones, C . H., P . N . Danese, J . S . Pinkner, T . J . Silhavy,
and S . J . Hultgren. 1997 . The chaperone-assisted membrane release and
folding pathway is sensed by two signal transduction systems . EMBO J . 16:6394-6406 .
- Jones, S . E., L . J . Lloyd, K . K . Tan, and M . Buck. 2003 .
Secretion defects that activate the phage shock response of Escherichia
coli . J . Bacteriol . 185:6707-6711 .
- Jovanovic, G., L . Weiner, and P . Model. 1996 .
Identification, nucleotide sequence, and characterization of PspF, the
transcriptional activator of the Escherichia coli stress-induced psp
operon . J . Bacteriol . 178:1936-1945.
- Kinder, S . A., J . L . Badger, G . O . Bryant, J . C . Pepe, and
V . L . Miller. 1993 . Cloning of the YenI restriction endonuclease
and methyltransferase from Yersinia enterocolitica serotype O:8 and
construction of a transformable R–M+ mutant . Gene
136:271-275.
- Kleerebezem, M., W . Crielaard, and J . Tommassen. 1996 .
Involvement of stress protein PspA (phage shock protein A) of Escherichia
coli in maintenance of the protonmotive force under stress conditions .
EMBO J . 15:162-171.
- Kovacikova, G., and K . Skorupski. 2002 . The alternative
sigma factor
E
plays an important role in intestinal survival and virulence in Vibrio
cholerae . Infect . Immun . 70:5355-5362 .
- Maloy, S . R., V . J . Stewart, and R . K . Taylor. 1996 .
Genetic analysis of pathogenic bacteria . Cold Spring Harbor Laboratory Press,
Plainview, N.Y.
- Mecsas, J., P . E . Rouviere, J . E . Erickson, T . J . Donohue,
and C . A . Gross. 1993 . The activity of
E,
an Escherichia coli heat-inducible
-factor,
is modulated by expression of outer membrane proteins . Genes Dev . 7:2618-2628.
- Miller, J . H. 1972 . Experiments in molecular genetics .
Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
- Miller, V . L., and J . J . Mekalanos. 1988 . A novel
suicide vector and its use in construction of insertion mutations:
osmoregulation of outer membrane proteins and virulence determinants in
Vibrio cholerae requires toxR . J . Bacteriol . 170:2575-2583.
- Model, P., G . Jovanovic, and J . Dworkin. 1997 . The
Escherichia coli phage-shock-protein (psp) operon . Mol . Microbiol.
24:255-261.
- Nakamura, T., Y . Katoh, Y . Shimizu, Y . Matsuba, and T .
Unemoto. 1996 . Cloning and sequencing of novel genes from Vibrio
alginolyticus that support the growth of K+ uptake-deficient
mutant of Escherichia coli . Biochim . Biophys . Acta 1277:201-208.
- Otto, K., and T . J . Silhavy. 2002 . Surface sensing and
adhesion of Escherichia coli controlled by the Cpx-signaling pathway .
Proc . Natl . Acad . Sci . USA 99:2287-2292 .
- Padan, E., and S . Schuldiner. 1987 . Intracellular pH and
membrane potential as regulators in the prokaryotic cell . J . Membr . Biol .
95:189-198.
- Padan, E., D . Zilberstein, and H . Rottenberg. 1976 . The
proton electrochemical gradient in Escherichia coli cells . Eur . J .
Biochem . 63:533-541.
- Raetz, C . R . H. 1996 . Bacterial lipopolysaccharides: a
remarkable family of bioactive macroamphiphiles, p . 1035-1063 . In F . C .
Neidhardt, R . Curtis III, J . L . Ingraham, E . C . C . Lin, K . Brooks Low, B .
Magasanik, W . S . Reznikoff, M . Riley, M . Schaechter, and H . E . Umbarger (ed.),
Escherichia coli and Salmonella: cellular and molecular biology .
ASM Press, Washington, D.C.
- Raivio, T . L., and T . J . Silhavy. 2001 . Periplasmic
stress and ECF sigma factors . Annu . Rev . Microbiol . 55:591-624.
- Raivio, T . L., and T . J . Silhavy. 1999 . The
E
and Cpx regulatory pathways: overlapping but distinct envelope stress
responses . Curr . Opin . Microbiol . 2:159-165.
- Rezuchova, B., H . Miticka, D . Homerova, M . Roberts, and J .
Kormanec. 2003 . New members of the Escherichia coli
E
regulon identified by a two-plasmid system . FEMS Microbiol . Lett . 225:1-7.
- Snyder, W . B., L . J . B . Davis, P . N . Danese, C . L . Cosma,
and T . J . Silhavy. 1995 . Overproduction of NlpE, a new outer membrane
lipoprotein, suppresses the toxicity of periplasmic LacZ by activation of the
Cpx signal transduction pathway . J . Bacteriol . 177:4216-4223.
- Testerman, T . L., A . Vazquez-Torres, Y . Xu, J . Jones-Carson,
S . J . Libby, and F . C . Fang. 2002 . The alternative sigma factor
E
controls antioxidant defences required for Salmonella virulence and
stationary-phase survival . Mol . Microbiol . 43:771-782.
- van der Laan, M., M . L . Urbanus, C . M . Ten Hagen-Jongman, N .
Nouwen, B . Oudega, N . Harms, A . J . Driessen, and J . Luirink. 2003 . A
conserved function of YidC in the biogenesis of respiratory chain complexes .
Proc . Natl . Acad . Sci . USA 100:5801-5806 .
- Vogler, A . P., S . Trentmann, and J . W . Lengeler. 1989 .
Alternative route for biosynthesis of amino sugars in Escherichia coli
K-12 mutants by means of a catabolic isomerase . J . Bacteriol . 171:6586-6592.
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